NONHSAT055550
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055550 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
513 nt |
Genomic location |
chr17+:66638639..66644037 |
Exon number |
2 |
Exons |
66638639..66638906,66643793..66644037 |
Genome context |
|
Sequence |
000001 gcggaaaaat gtaatctcag ttaatttgag gtttcttcct gccctggcat tgtatttaaa ttcaggggaa ctGGATGTCT 000080
000081 CATGGGTTTT TCTACTTTTT AATATAATCT GGTTATATGG GCATTGGGTA AGATATCTGC CGCCTGATTT GATCCTTCCT 000160 000161 CATTGGCCCA AGCATGTCAC CACGGAGACT TCCTTGTTCG TGTCTATATG GTTCATACAT GGCCTTCCCC TTAATTAAAG 000240 000241 ATGTCTTCCG AGGAACATTT TGTCTAAGcc tgattgaacc ccaacCAgag gctgaggcag gagaatcact tgaacccaag 000320 000321 aggcagaggt tgcagtgagc cgagattgca ccattgcact ccagcctggg caacaagagc aaaactccat ctcaaaaaaa 000400 000401 aaaagaaaag aaaaaCTAGA ACCTCATTTA TTACTACTGA GAACTGTAGA ACTGCAAAGT GGTTCTaaag ttgtagaacc 000480 000481 actttagaaa aaattgggcg atttcttgta aag |
Predicted Small Protein
Name | NONHSAT055550_smProtein_173:337 |
Length | 55 |
Molecular weight | 6161.1405 |
Aromaticity | 0.0925925925926 |
Instability index | 104.059259259 |
Isoelectric point | 7.70880126953 |
Runs | 9 |
Runs residual | 0.00397470641373 |
Runs probability | 0.0133859349546 |
Amino acid sequence | MSPRRLPCSCLYGSYMAFPLIKDVFRGTFCLSLIEPQPEAEAGESLEPKRQRLQ |
Secondary structure | LLLLLLLLLLLLLLHHHLHHHHHHHHLLEELLLLLLLLLLLLLLLLLHHHHLLL |
PRMN | - |
PiMo | - |