NONHSAT055612

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT055612

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1698 nt

Genomic location

chr17+:68071387..68098351

Exon number

2

Exons

68071387..68071531,68096799..68098351

Genome context

Sequence
000001 AGGAACAAAC CGGTGTCAAT GGTTAACCCA GGTTCTTGGT GTCTGGAGCT TTTCTTTCCT TTATTATTAA CTAAAGAGCA 000080
000081 TTCTCTACCA TTGCCCAGCT GAAAGCACCT AGCTCATAGA TTCTCTGTGG GGAGAGTGAA TAAAGaatgg gggattgagg 000160
000161 cacagagtgt taaaatagtg agacacagga ttctaactgg cagactggca ctttatctca attcttAACT GCTGTGTTGC 000240
000241 CTCTCACTTT AAAGATAAGA AATTAAACCA ATTTTAACAT GATTCTCCGA AAAACCAATA CTTGCACTCC TTCCTCCATG 000320
000321 AAAATGTGCT TTATCCCTAC GCATTTTTCC AGAAGTCCAG CTTTCTACTT ATACGTTTAT ATTTTCATAA ACTTTGCTAC 000400
000401 AGAGCAAATT CGGTGTTACA AACATTGCTT CCTTTTGTTC ACATTTTACA CGTTTACTGC CTCCTTAAAT CATTCACCTT 000480
000481 CACTGTATTT TAGGAAAGAA ATGCTATTTA TATATTTTGT GAATCCACAG TCTATTATAC ATTCTGCTAA CTAAGAATAA 000560
000561 AACTTGTCTA CTTGGTTATT TGAGTCTAGA Gaatgatttt caacctggag tgactttgct caccaaggga catctggcaa 000640
000641 tgtctggtca catttttgga tgtctctact ggggtttggg gtcatactgg catctagtgg gaagagttta gggatgctgt 000720
000721 taaactaaat gccataacca caggtcatct tcccacaaca aagaattttc tggccctaaa tattgaggtt gagaaacccA 000800
000801 GATCTAGGAT ATTCTGTGCA TTTAAAATGA TTCCGTTCAG AACAATTTAG GTACTTTCTC AATAGTACTG CAAAAGCTAT 000880
000881 ATGAAAACTA TATGTATATA AAAATTATAT CTATCTGTCT CTAGCTACAT TAACATATCA ATCTGCTAGG TTAAGTAGAC 000960
000961 TCAATTTAAC CATCTGGTGT TTCATGTTTG CTTTTGATTT GTAAAAGACT CAGACCTATA ACATAGCCTT AATGCTAATA 001040
001041 TCATTCTTGA GATAAACGAT TATAATTGCA GAtttctttt tttttgagaa agagtctcgc tctgtcaccc aggctggagt 001120
001121 gcagtggcac catctcagct cactgcaaac tccacctccc aggttcaaac aattctcctg cctcagcttc ccgagtagct 001200
001201 gggattacag gtgcccgcta ccaATACTTG CAGATTTCTT TAGTGTTATG TTATTTAGCC ACTCATCCAT TTTTTTAAAG 001280
001281 ATTTAAGTAT TAAGCATTCA CTGTACACCA AGCAATGTTC TTAGTGAACA AGTAATTTAG AATTAGATTA CAATTAAATT 001360
001361 GTGGATTTTA GGACATTTTA GTTAACGTTT ACTGAAAAGT ATTATCACAG AATTTATATT TTCTATAGTT TATGTTGTTT 001440
001441 TATATGATTA TAAAAGCAAT GATTTAAGAA TTAAGTGAAG TATTTTACAT GATGTGGAAA AAATGAGAGA AAAAGATGGA 001520
001521 AAAGAGTTGA TTGAATTATT CATTTTCACC TGATTAGTTG AAGCCAGTGG TTAGTAACAT CACATGCACA AAGGACCCAG 001600
001601 TGGCTGATTC AAAATAGTAT TCCATTCTCT CCCCATGATT TTACAATGAA ACTACGAGAC CAATCAGGAC ACCTTCTTCT 001680
001681 TTCTTCTTGT TCACCAAA
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Predicted Small Protein

Name NONHSAT055612_smProtein_278:553
Length 92
Molecular weight 10892.698
Aromaticity 0.208791208791
Instability index 60.9969230769
Isoelectric point 9.38763427734
Runs 14
Runs residual 0.0203754578755
Runs probability 0.089661089661
Amino acid sequence MILRKTNTCTPSSMKMCFIPTHFSRSPAFYLYVYIFINFATEQIRCYKHCFLLFTFYTFT
ASLNHSPSLYFRKEMLFIYFVNPQSIIHSAN
Secondary structure LEEEELLLLLLLLLEEEEELLLLLLLLLEEEEEEEEEHHHHHHHHHHHHHEEEEEEEEEE
ELLLLLLLHHHHHHHEEEEEELLLEEEELLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHH
HHHHLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTTTTT
TTTTooooooooooooooooooooooooooo