NONHSAT055652
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055652 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
510 nt |
Genomic location |
chr17-:70067190..70114439 |
Exon number |
5 |
Exons |
70067190..70067372,70078062..70078182,70080047..70080169,70081131..70081186,70114413..70114439 |
Genome context |
|
Sequence |
000001 TCCCCGACCA GAGGACCTCA GACACAGcca aaaacaatcc attgatacaC TTGGTGACAT TAATTGAGAA AAAAACAATA 000080
000081 TGGTCTGGCC ATGGAGGCAT GGTATCCGTA ACATCCCCCA AAGGAGCTAA AGAAGAAATC CACAATTTAC CATGAGCATT 000160 000161 TCTCGTCTGA AGATTGCCAA GCGATTCCTC CAGGACATTC CTCAAGATCA ATTTCTGTTC ATCCACCTTG TCCTGGGAGG 000240 000241 GACATCAATG ggtttccatg tcctttggct tctggttgag ttcactcagt ggagaaccct ggcaagaggc aggaaaaggg 000320 000321 gaggaagGTG AAAACCATCC ATTTCTTGGA GAAGTGCCAC GGTGGGGTTG CAAGTCCCAG GATCAAGTTT TCGATGTGTC 000400 000401 TCTTTTTCCC GTAAAGTGGC TGAAATCTGA AGCTGAATCT GCAAGTGTCa tggagtcatt gaatctcaca gtctcaactg 000480 000481 ataaaagtta ttaaaggtcg tctggttcag |
Predicted Small Protein
Name | NONHSAT055652_smProtein_257:493 |
Length | 79 |
Molecular weight | 8716.5777 |
Aromaticity | 0.128205128205 |
Instability index | 48.8141025641 |
Isoelectric point | 4.51361083984 |
Runs | 11 |
Runs residual | 0.0073483427142 |
Runs probability | 0.0398821281175 |
Amino acid sequence | MSFGFWLSSLSGEPWQEAGKGEEGENHPFLGEVPRWGCKSQDQVFDVSLFPVKWLKSEAE SASVMESLNLTVSTDKSY |
Secondary structure | LLEEEEEELLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEEEEEEELLHHH HHHHHHHLLLEEELLLLL |
PRMN | - |
PiMo | - |