NONHSAT055653
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT055653 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
480 nt |
Genomic location |
chr17-:70067190..70080222 |
Exon number |
3 |
Exons |
70067190..70067372,70078062..70078182,70080047..70080222 |
Genome context |
|
Sequence |
000001 GCTCGAGGTA CCCACTCCCT GGTAATCACC TCTGATTTTA AACTTCCTAA CAGTCTGGCC ATGGAGGCAT GGTATCCGTA 000080
000081 ACATCCCCCA AAGGAGCTAA AGAAGAAATC CACAATTTAC CATGAGCATT TCTCGTCTGA AGATTGCCAA GCGATTCCTC 000160 000161 CAGGACATTC CTCAAGATCA ATTTCTGTTC ATCCACCTTG TCCTGGGAGG GACATCAATG ggtttccatg tcctttggct 000240 000241 tctggttgag ttcactcagt ggagaaccct ggcaagaggc aggaaaaggg gaggaagGTG AAAACCATCC ATTTCTTGGA 000320 000321 GAAGTGCCAC GGTGGGGTTG CAAGTCCCAG GATCAAGTTT TCGATGTGTC TCTTTTTCCC GTAAAGTGGC TGAAATCTGA 000400 000401 AGCTGAATCT GCAAGTGTCa tggagtcatt gaatctcaca gtctcaactg ataaaagtta ttaaaggtcg tctggttcag 000480 |
Predicted Small Protein
Name | NONHSAT055653_smProtein_227:463 |
Length | 79 |
Molecular weight | 8716.5777 |
Aromaticity | 0.128205128205 |
Instability index | 48.8141025641 |
Isoelectric point | 4.51361083984 |
Runs | 11 |
Runs residual | 0.0073483427142 |
Runs probability | 0.0398821281175 |
Amino acid sequence | MSFGFWLSSLSGEPWQEAGKGEEGENHPFLGEVPRWGCKSQDQVFDVSLFPVKWLKSEAE SASVMESLNLTVSTDKSY |
Secondary structure | LLEEEEEELLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEEEEEEELLHHH HHHHHHHLLLEEELLLLL |
PRMN | - |
PiMo | - |