NONHSAT055739

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT055739

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1549 nt

Genomic location

chr17-:71745409..71824676

Exon number

4

Exons

71745409..71746637,71757074..71757165,71819827..71819964,71824587..71824676

Genome context

Sequence
000001 AAAAAGCTCT GGAAATAGAT CATCAGGATG GTTGCACAAT GTTTTGAATG TAAATGCCAC TGAATTGTAC ACCTTAAAAG 000080
000081 GGCTCAAATG ACGTCATCAG CACCCACCCT CCCAGATGTG ACAATCAGAA ATGTGTCCAG ACATATCCAG ATGTCCCTTA 000160
000161 TGGGGAAGGG AGAATCGCCC TGGCTTTGCA GACTCCAGCT GGAACCCCTG CTGCAAGCGA TGGAGGAGCA ACAGCTCGGC 000240
000241 AATCTGGAGG CAAGGTGGGA GGTGGAGAAG CACGGAAACG AAGTCTCTGG CTCAACCAGC AAAAGTGAAC CACTCCCCAG 000320
000321 CAGTGGAAAC CGGGGCTTCC TAGAAGAAAC GATGCACTCC CCACCTCCCT CTGTTTGTGC TGCAGTGAAA ACTGACACGA 000400
000401 GAGATTCATT GGAACATGTG CCCTCGTTCC ACTCTCATCA GCCCACCGCA GGGACAGGAG CTGTTCATCT TTTTGGCTGT 000480
000481 GCTCGCAGCC TCCAGAACAC TTATGAGGGG CACCTTGTGG GCGCCGTGGT CGGATGAGGC CCCTGGGGCT CTTCCAGAGG 000560
000561 CTGGCACTCT CTGCAGTTGT CGCTCACATA CCTGCTCAGG CCAGGCCAGG CCAGAGTGGA CAATGTCTTC CCAGCAGGCC 000640
000641 AGACCAGTCT CCCAGGAGGC TGAGGCTGCT GTATCACTCA CCAAACCCTC TCATCTGCCG GCCTGACCCT GTGCTATGCT 000720
000721 GGAAATAGCA CTCGAGCCAG ACGCCCTCCC TGACTTGGAC AAGGGCAGTG CCCTGGAAGG AGAGGGCACA GAAGCAGCTG 000800
000801 TTTACAGAAC CTCCGAGGGC TGCAATGGGG CAATGGGGTG TGCAGGAGAG TGACCAGGAG CCCGGGGCAG CTGGTGACCC 000880
000881 ACCCCTCCAG GCATTCGTGA GGTGTCAGAA GAGGGGGCCC CTTGAACGGG GCCTGCAGAG ATGGCTAAGA GTCCATCAGG 000960
000961 CAGATGAAAT GATTTGCTTT CTTCACACTT ACCAAGCTTA GAAATGACCT CCTTCATGCA TGTGAATGAC TTTATTCATG 001040
001041 TATATGACTC ACCTTCCTCA TGCATGTGAT GATCTTATTG TATGTGACTC ACTTTCATGC ACGTGATGAC CTTATCCATG 001120
001121 TATGTGACTC ACCTTCATGC ATGTGATGAC CTTATTCATG TAGGTGATTC ACCTTCTTCA TGCATGTGAT GACCCTATCC 001200
001201 ATGTATGTGA TTCACCTTCT TCATGCATGT GATGACCTTA TTCACGTATG TGATTTGCCT TCTTCATGCA TGTGATTACC 001280
001281 TTATACATGT ATATGACTCA CCTTCATGTA TGTGATGACC TTATTCACAT GTGACTCGCC TTCTTCATGC ATGTGATGAC 001360
001361 CTTATTCACA TGTGACTCGC CTTCATGCAT GTGACGACCT TATCCATGTA TGTGACTCAC CTTCTTCATG CATGTGATGA 001440
001441 CCTTATCCAT GTATGCGACT CACCTTCTTC ATGCATGTGA TGACTTTATC TATGAATGTG ACTCATTGTT TGTCTTCCCA 001520
001521 TCCCCCTAAA ACATAAACTC AATGAGAGC
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Predicted Small Protein

Name NONHSAT055739_smProtein_533:727
Length 65
Molecular weight 7180.4229
Aromaticity 0.046875
Instability index 83.7359375
Isoelectric point 11.2172241211
Runs 9
Runs residual 0.00796875
Runs probability 0.0435827984849
Amino acid sequence MRPLGLFQRLALSAVVAHIPAQARPGQSGQCLPSRPDQSPRRLRLLYHSPNPLICRPDPV
LCWK
Secondary structure LLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLEEEEEELLLLLLEELLLLL
EELL
PRMN -
PiMo -