NONHSAT055816
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055816 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
863 nt |
Genomic location |
chr17-:72769133..72772490 |
Exon number |
3 |
Exons |
72769133..72769824,72771761..72771846,72772406..72772490 |
Genome context |
|
Sequence |
000001 GGCGGTAGCC GGCCGGGCCT GGGAACGTGG CTGGTTGGAG GAGGTAGATC ACCCTTTCTG CGGGGGACGA TTTCGTCGGT 000080
000081 GGTAGGCTGC TACCATGAGG TTGAATCAGA ACACCTTGCT GCTGGGGAAG AAGGTGGTCC TTGTACCCTA CACCTCGGAG 000160 000161 CATGTGCCCA GGTACCACGA GTGGATGAAA TCAGAGGAGC TGCAGCGTTT GACAGCCTCG GAGCCGCTGA CCCTGGAGCA 000240 000241 GGAGTATGCC ATGCAGTGCA GCTGGCAGGA AGATGCAGAC AGTGAGGAGT GCCCCCCCAC TTCCCCTAGC CCTGGTACTG 000320 000321 GGAGGGCTGA CTCCACAGTC AGTCTCCAGG TTCCTTCCCT TTCCCAGCCC CGGCCATAGA AGCTTTGTGA AAAGCCTGGA 000400 000401 AGGTGCTGGA ACTCCTGTAT TCTCATGGCC CTGAAGCCAG TCCCTGTGGC TGACCCTTCT GTCCTCTTCC CCACCCACTG 000480 000481 CATCGGGCTT GGAAGGATTT GGAGAAAGTA GAGCATTTGG GGCTCTGGCT GTAAATTGAG GCCCTGCCCC TCATGTCCCT 000560 000561 CACCACAGCC TAGTGTGGTG ACTGCCCTCC TCTGTGTTCC CTGCTCTCTG AGAATTTGGT TGCTGGTTGG AGAGGCTTTT 000640 000641 TCTGTATGAG GCAGATTTGG AATTTTGTAA TGAGCTGAAG GAAGCTCTGG GACCCCCTCT TCTCCTGGCA GACTCAGAGA 000720 000721 TGCTGGTGTT CTGCAGTGCT CTGGCTTGGG TAGGAGTACC ATCCTCTCTT CTCTCCTCTG GGGAGTGTGT GTGATAGCCC 000800 000801 TGTCACCTCC TCCTCAGAGT GTACCTTCAT TGTGCTGGAT GCCGAGAAGT GGCAGGCCCA GCC |
Predicted Small Protein
Name | NONHSAT055816_smProtein_245:433 |
Length | 63 |
Molecular weight | 6518.592 |
Aromaticity | 0.0806451612903 |
Instability index | 77.9516129032 |
Isoelectric point | 11.5552368164 |
Runs | 7 |
Runs residual | 0.0407373271889 |
Runs probability | 0.0473162237868 |
Amino acid sequence | MPCSAAGRKMQTVRSAPPLPLALVLGGLTPQSVSRFLPFPSPGHRSFVKSLEGAGTPVFS WP |
Secondary structure | LLLLLLLLLLLEEELLLLLLLEEELLLLLLLLLLLLLLLLLLLLHHHLLLLLLLLLLLLL LL |
PRMN | - |
PiMo | - |