NONHSAT055817
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055817 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
565 nt |
Genomic location |
chr17-:72769450..72772506 |
Exon number |
3 |
Exons |
72769450..72769827,72771761..72771846,72772406..72772506 |
Genome context |
|
Sequence |
000001 ACGCGCATGC GGAAGGGGCG GTAGCCGGCC GGGCCTGGGA ACGTGGCTGG TTGGAGGAGG TAGATCACCC TTTCTGCGGG 000080
000081 GGACGATTTC GTCGGTGGTA GGCTGCTACC ATGAGGTTGA ATCAGAACAC CTTGCTGCTG GGGAAGAAGG TGGTCCTTGT 000160 000161 ACCCTACACC TCGGAGCATG TGCCCAGCAG GTACCACGAG TGGATGAAAT CAGAGGAGCT GCAGCGTTTG ACAGCCTCGG 000240 000241 AGCCGCTGAC CCTGGAGCAG GAGTATGCCA TGCAGTGCAG CTGGCAGGAA GATGCAGACA GTGAGGAGTG CCCCCCCACT 000320 000321 TCCCCTAGCC CTGGTACTGG GAGGGCTGAC TCCACAGTCA GTCTCCAGGT TCCTTCCCTT TCCCAGCCCC GGCCATAGAA 000400 000401 GCTTTGTGAA AAGCCTGGAA GGTGCTGGAA CTCCTGTATT CTCATGGCCC TGAAGCCAGT CCCTGTGGCT GACCCTTCTG 000480 000481 TCCTCTTCCC CACCCACTGC ATCGGGCTTG GAAGGATTTG GAGAAAGTAG AGCATTTGGG GCTCTGGCTG TAAATTGAGG 000560 000561 CCCTG |
Predicted Small Protein
Name | NONHSAT055817_smProtein_110:397 |
Length | 96 |
Molecular weight | 10699.8563 |
Aromaticity | 0.0526315789474 |
Instability index | 75.3294736842 |
Isoelectric point | 4.87738037109 |
Runs | 13 |
Runs residual | 0.00779113137174 |
Runs probability | 0.0423817482641 |
Amino acid sequence | MRLNQNTLLLGKKVVLVPYTSEHVPSRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQE DADSEECPPTSPSPGTGRADSTVSLQVPSLSQPRP |
Secondary structure | LLLLEEEEEELLEEEEEELLLLLLLLHHHHHHLHHHHHHLLLLLLLLHHHHHHHHLLLLL LLLLLLLLLLLLLLLLLLLLLEEEEEELLLLLLLL |
PRMN | - |
PiMo | - |