NONHSAT055878
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055878 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1281 nt |
Genomic location |
chr17+:73268701..73269976 |
Exon number |
1 |
Exons |
73268701..73269976 |
Genome context |
|
Sequence |
000001 CCAGCTCTGG GTGAAAGAGG AGTCAGTGAG GTAGACTGGG GAGAGGCTGC ACCTTCACCC ACGCCTGCCC ACAGCATGGC 000080
000081 CCATCCACTT CCTGCACGGG CGCTGGGATC TGCTTTCCAT GGAGCCCCAC GGCCATGACC AGCCCGGTCC TGGGAGAGGA 000160 000161 CAGCCTGGGT GGTGGTGTGT CTGCAGACAC GAAGGTCTGG GCACGGGGCC CAGAAAGTGA CTGGCTCAGC CTGGAGTCTC 000240 000241 CCCCAGCACT AGAAGCAGAG CTGCCAAGGG CTGCCGCTAT GGAGAACATG GGATTTGAGG AAGGCAGGAG TCCTTTCCCT 000320 000321 CATACTTTGT GAGTAGGCAG ATGTGCCAGG GGAGATGGAG TAAGATAAGG AATGTGTGTT TAGCTTTAAT GTCTATTAAA 000400 000401 TAGGTTGGAA AAACAGGCCA AGTGTAGGGA CCTGACTCCT GCAAAGGGCC TACCGCAGCC CTCTGCACTC AAGCAGCAGC 000480 000481 CCCATCCAGA CCAGGAGTGT GTTCTGTTCT CCTGGCAGGC AGGGCTGATA GGTGTAGGAT GGCGTCTGTT TCCTTTGGAG 000560 000561 TGTGGGCTGG TCAGAGGAGA AACAGCAACT TCCTGCTCCT TCTCACTGTG TCGTTGGCTC ACCATAGACC ACGTCCTGCA 000640 000641 TTCCCTCTGA TTCTCTCATG GGGAGAGCCC TGGACCTTCT GGTGGTGTCC CAGCTGGGTG GGTTCAAGGC TGCTACCCCG 000720 000721 CTTGGGGCAG CTGGCCTGCA GGGAAGGGCC AGACGGCACC TCTCAGTGGA GACTGAATCT TCCTTCCTTC AGGAGGCTGC 000800 000801 CTCCAGGGAA GACCTGGGGT CCTTCCTGCG CTCAGCGCTG GCTGGCTGTC CTGTTCATGC AGTGGAAGAC ATTACAGAAG 000880 000881 AATTCATACG AGAAGAACAT GAAGCCTGTG GAGAGGGCAG CCTTCAGCAA GCTGGGGGAC AGGCCCTTGA AGAAGCCCAG 000960 000961 GGCGCCTTCC TTTTGCAGCA CCTGCTTGGC ACAGTCCATG AGGCCCTTGT ATCTCCGTAC CTGGGGAGAG GAAAGGGATG 001040 001041 AAAATATGGA TGCCCGCTCT GCTCCCATCA ACACAGCCCC TGGCACATCA CAGATCTTAA GAAGTACTTG CTGGACAAAG 001120 001121 AAATGAATGC AAAATAGCAA ATTATTTTAT TTTATTTTTT CGTTGAGGCA GAGTCTCACT CTGTTGCCCA GGCTGGAATG 001200 001201 CAGTGGCACA ATCTTGGCTC ACTGCAGCCT CTGCCTCCCA GGTTCAAGTG ATTCTCCTGC CTCAGCCTCC TGAGTAGCTG 001280 001281 G |
Predicted Small Protein
Name | NONHSAT055878_smProtein_134:331 |
Length | 66 |
Molecular weight | 6883.576 |
Aromaticity | 0.0615384615385 |
Instability index | 67.4353846154 |
Isoelectric point | 4.28314208984 |
Runs | 7 |
Runs residual | 0.0425961538462 |
Runs probability | 0.0350518585813 |
Amino acid sequence | MTSPVLGEDSLGGGVSADTKVWARGPESDWLSLESPPALEAELPRAAAMENMGFEEGRSP FPHTL |
Secondary structure | LLLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLHHHHHLHHHHHHHHLLLLLLLLL LLLLL |
PRMN | - |
PiMo | - |