NONHSAT055879
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055879 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
568 nt |
Genomic location |
chr17-:73284201..73285530 |
Exon number |
2 |
Exons |
73284201..73284672,73285435..73285530 |
Genome context |
|
Sequence |
000001 AGTTTCGTCC GAGCTCAGTA GAGTTTTGCT GTTAAGACTG CGCGAGGAGC TAGAGAGAGC GGAGAGCGCT GAGCCGGGCC 000080
000081 GCACCCGCCG AGCCGTCCCT TCTCCCTGTG ATCAGTTACC AACTACCTGT TGATGTGTGT GGTTACAGAC TTCTTTCTAT 000160 000161 GCTTTGTACA ACTCTACAGA CCGTATGTAG GTATTACTGT TTTTGTTTTT TGTTTTTACA AAAAAGGAAA AAAGTACATC 000240 000241 tcctggaagg gatgcttttt agctgagctc tggtggatga gaggagctag ccttgaaaaa gtgagtaggg gctgagagtg 000320 000321 gggctgtatt tcagacgtag ggaactggag gagtagaggc aaggcaattg ataggagtgc tccccgagtt ttccaggaac 000400 000401 tgggcagaag cagtcagacc actctggtta aatgagggaa ggggaagagt ggtccagagt gaggctgaag aggtCAGTAG 000480 000481 GTCTGAGTCA GGGGAGCCCA GGAGCGTCAt tttctttttt gttttgtttt gtttttttgt ttttgagacg gagtctcact 000560 000561 ctgtagcc |
Predicted Small Protein
Name | NONHSAT055879_smProtein_431:565 |
Length | 45 |
Molecular weight | 5098.9041 |
Aromaticity | 0.159090909091 |
Instability index | 68.0681818182 |
Isoelectric point | 11.3264770508 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.0461427814369 |
Amino acid sequence | MREGEEWSRVRLKRSVGLSQGSPGASFSFLFCFVFLFLRRSLTL |
Secondary structure | LLLLLLLEEEEEELEELLLLLLLLLLHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToo |