NONHSAT056028
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056028 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
804 nt |
Genomic location |
chr17+:74536631..74549419 |
Exon number |
7 |
Exons |
74536631..74536655,74538635..74538715,74539111..74539203,74539885..74540014,74540314..74540452,74541612..74541718,74549191..74549419 |
Genome context |
|
Sequence |
000001 ATGCGGACCC TCAGTCCTCA GGCAGGGAGA AAGAACCTCT GAAGTAAGCC CTCACCTCTG CAGGTGGGGC TCAGGCCCAG 000080
000081 AGACTGGGAT CAGCTGGCTC AGGCAGCTCA GGTCCTGGTT CGTCCCCTAG CCCAGGAGGA TGCTGTGGGA GCTGCAGCAG 000160 000161 CGGCAAGAGG GAGAATGGGG GGAAGCAGCA CTAGAGAAGt tcccagagct catcctgtca ctggctgctc tgctgaaatt 000240 000241 atcaataaga aatgccagtt ggatctgtga catgtctgcc tgcagctgga tgggaGCAAC GGACAGCTTG TCCTCCGAAT 000320 000321 GTGTTTTCTC CAGCCCCCCT CCCAGCCCAG CGGCGATGTC TCTGCCTGGC TGGCCCGTGC CCTTGACTTC CAGGCAGTAG 000400 000401 AAGATGGAGT TCTCTAGACA GCAGCACTTC AGCCGCCACT CTGCCTCTGA AGGGAAGGAA GGGAAAGGGG TGCTGGCTAC 000480 000481 TGTGAAataa caagagtcca agagcaaggt gtccagagtc agagctcctg ggtttgaacc ttgttccacc agcacatcct 000560 000561 acctctgtgg cctggtcctt cagctcctac ttaatggaag cctcgcagat gcaagatggc tccagcaggc ccagcatcac 000640 000641 ttcttctcag tgtcccaaag ccagaagaga ggctgttgtt tttaaaagca ggaaaacttt cctaaacttg gccagaattg 000720 000721 catcacagac cctttcctaa aacaatttcc agcaaaggga atagacttac catgtctggt acagatgaat caaggtttgc 000800 000801 ccct |
Predicted Small Protein
Name | NONHSAT056028_smProtein_593:739 |
Length | 49 |
Molecular weight | 5301.0066 |
Aromaticity | 0.0416666666667 |
Instability index | 62.1604166667 |
Isoelectric point | 10.8866577148 |
Runs | 6 |
Runs residual | 0.0405701754386 |
Runs probability | 0.0414237767179 |
Amino acid sequence | MEASQMQDGSSRPSITSSQCPKARREAVVFKSRKTFLNLARIASQTLS |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLHHHHHHHEEELHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |