NONHSAT056079
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056079 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1001 nt |
Genomic location |
chr17-:74730245..74731743 |
Exon number |
2 |
Exons |
74730245..74730644,74731143..74731743 |
Genome context |
|
Sequence |
000001 AATAAGAAGC AGTGAACATT TGGAACCCCA AAAGAAAGTT ACAGGTATTG CACTGGGTGG GGAAAGGATA GTGTGTCTTT 000080
000081 AACTCTTAAA TTGTTTGGTC CTATTTTTTA AAAAGGAAAG GGCCCTAAGT AGCTCAGATA TTAAAGTAGT ATTCTCAATT 000160 000161 ACCAAATGTT TCATTTGAAA CAATTTATCT TAATGAAATA TAGACCAATT CTCTGATCTC GAGTTGTTTT TGTTTGGATA 000240 000241 CAGCCCTttt ttttttcttt ttttttcttc cccttacctt tcttCACCTT GGTTATTTGG CCAGGAATAC GTAAATTCAA 000320 000321 ACTTGTACAT GCTGATGGTA GCCTTTGTGA AATTTTCCTA ATTGGGCCTT TTAAAAACAT GGCTGGGTGG AACATTTCTG 000400 000401 TACCCTACTG GTTTGACCAG AGCCTTAGTA AGTACGTGCC TGAAACTGAA ACCATGTGCA CTTTAATGGA AGGTAAGCTG 000480 000481 AACTTCTTTC TTTTCAAACC TAGATGTATC GGCAAGCAGT GTAAACGGAG GACTTGGGGA AAAAGGACCA CATAGTCCAT 000560 000561 CGAAGAAGAG TCCTTGGAAC AAGCAACTGG CTATTGAAAA GGCGCAGTTG TGTAGCAGTT GAGTAATGCT GGTTAGCTGT 000640 000641 TAAGGTGGCG TGTTGCAGTG CAGAGTGCTT GGCTGTTTCC TGTTTTCTCC CGATTGCTCC TGTGTAAAGA TGCCTTGTCG 000720 000721 TGCAGAAACA AATGGCTGTC CAGTTTATTA AAATGCCTGA CAACTGCACT TCCAGTCACC CGGGCCTTGC ATATAAATAA 000800 000801 CGGAGCATAC AGTGAGCACA TCTAGCTGAT GATAAATACA CCTTTTTTTC CCTCTTCCCC CTAAAAATGG TAAATCTGAT 000880 000881 CATATCTACA TGTATGAACT TAACATGGAA AATGTTAAGG AAGCAAATGG TTGTAACTTT GTAAGTACTT ATAACATGGT 000960 000961 GTATCTTTTT GCTTATGAAT ATTCTGTATT ATAACCATTG T |
Predicted Small Protein
Name | NONHSAT056079_smProtein_866:943 |
Length | 26 |
Molecular weight | 2967.7444 |
Aromaticity | 0.04 |
Instability index | 43.432 |
Isoelectric point | 10.0604858398 |
Runs | 4 |
Runs residual | 0.0483018867925 |
Runs probability | 0.00103780250839 |
Amino acid sequence | MVNLIISTCMNLTWKMLRKQMVVTL |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHEEL |
PRMN | - |
PiMo | - |