NONHSAT056140
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT056140 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
548 nt |
Genomic location |
chr17+:75284031..75398282 |
Exon number |
4 |
Exons |
75284031..75284296,75290571..75290653,75303223..75303279,75398141..75398282 |
Genome context |
|
Sequence |
000001 GTCATCCTCA GAGCGGTGTT GGCCCGGGGC CTTCAGTGGC CTTTGTGTCT GGGTGAGAGG AACCCTGGAT GGCCACTCTG 000080
000081 CCCTGAGTGT GTGGGTCCCC AGAAGTGCTG GGTTAGGGGG CACGGAGGGC CAGAAAGTCC CCTTTGGAGC GCTGGACTCT 000160 000161 CTCGCTGACT CCTACCCCAC CCCGGCCTGG GGTTTCAGAG AAGGGGTCCA GGCAGGAGTG TCATCTTTTC TCAATGGGGA 000240 000241 TGTGGCTTCA GTCTCTGTCC AGGTGGttgg gatgtataca aaagtggcgg tcaacatgga gttggtggtg ctgctacaat 000320 000321 tgttttgttc aagatacaca ggaattctgG AGGCACGCGG ACCTCCAGTG GCCGGCTCCG GAGGCTTGGT GACTCCAGTG 000400 000401 GCCCAGCCTT GAAAAGATCT TTTGAGGTCG AGGAGGTCGA GACACCCAAC TCCACCCCAC CCCGGAGGGT CCAGACTCCC 000480 000481 CTACTCCGAG CCACTGTGGC CAGCTCCACC CAGAAATTCC AGGACCTGGG CGTGAAGAAC TCAGAACC |
Predicted Small Protein
Name | NONHSAT056140_smProtein_233:391 |
Length | 53 |
Molecular weight | 6540.4116 |
Aromaticity | 0.230769230769 |
Instability index | 71.1557692308 |
Isoelectric point | 6.50469970703 |
Runs | 9 |
Runs residual | 0.0227075184702 |
Runs probability | 0.029254744941 |
Amino acid sequence | MGMWLQSLSRWLGCIQKWRSTWSWWCCYNCFVQDTQEFWRHADLQWPAPEAW |
Secondary structure | LLHHHHHHHHHHHHHHHHHLLLEEEELLLEEELLLHHHHHHHLLLLLLLLLL |
PRMN | - |
PiMo | - |