NONHSAT056244
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056244 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1097 nt |
Genomic location |
chr17-:76704994..76733049 |
Exon number |
2 |
Exons |
76704994..76705814,76732774..76733049 |
Genome context |
|
Sequence |
000001 AACTGGGTGG TGGCACTGAC TGGGAGTGCC GCTTCTTTGG AGGCTGGAGG TTGATTGGCC CAGGCGTGCA GCCAGCCATT 000080
000081 GCCTGTCTGT TCAGGAAGCA GCTCTGAGCT GCCCTAGTGG CTGGACAGCT TCACAGGTAT CCCCGGCCCC TCCCAGTCAG 000160 000161 ACCCCACAGG AAAACTTGGC TCCCAGTAAG TTACCGCTCT CCTGGAAGCA CAGAACGGAC TTTTCGTGTC CCGCTGTAAG 000240 000241 GAAACAAGAT GGTCCTTAAA ACCGAAGAGG AGGACGTTCC CAGTGACCTG ACAGCAGAGG AGCGTCAAGA ACTGGAGAAC 000320 000321 ATCCGACGGA GAAAACAGGA GCTGCTGGCT GACATTCAGG TAGGAGAGTG GCATGGTGGT TTCACCAACG TAAGAACCAC 000400 000401 AGTGACAGtt ccatttgtat gaaagggtgt cctttgcaga gtgtctcctc aagacacttt tgacctgccc tcactacagc 000480 000481 tctgcacaaa gcgtaggtgt tgataatcag tcacctttcc tctacagctg aggagatgca gtgtcagaga ggttgagtgg 000560 000561 cttgtccagg ttcacccagt tggtcggttg tcggagctgg agatagcctg caagactcct gtctcctgag tagtcctctc 000640 000641 tgctGTGTTT GCCCTTGCGG Agcagagtgg atgaggagag gcaatgagaa tgtgggcttc aggcgaagct cggcccacgc 000720 000721 cctggctctg gctctgccgc ttactggctg aatgatttga gacaagagag ttccggttcc ttgaacttca gtttcttcat 000800 000801 ctgtcagatc atgaaaacac ctgctacaca gttggaagga cttagcatga aagacagcat AATTTCTGGT CCCTATAGAT 000880 000881 GTACTTAGTG ATAGCAATTT TACAATTACA ATTTTTCCAA GTTCCTTTTT GTAACTATCA AGCTTGTAGG AAATAAGTCT 000960 000961 AGAAGCCAAT AGTTGGATTA TTTTCGCCCT AAGACAGCAA ATGTTATTCT TTCAGAATTC TTCACAAGAC ATTAGGAGTG 001040 001041 GGGTTAAGGA GGGAATCCTG TTGCCCAAAG TAGCAAAATG AGGAAAGACT TGACTTT |
Predicted Small Protein
Name | NONHSAT056244_smProtein_248:421 |
Length | 58 |
Molecular weight | 6611.3232 |
Aromaticity | 0.0526315789474 |
Instability index | 79.9701754386 |
Isoelectric point | 4.66729736328 |
Runs | 7 |
Runs residual | 0.0311403508772 |
Runs probability | 0.0334115628234 |
Amino acid sequence | MVLKTEEEDVPSDLTAEERQELENIRRRKQELLADIQVGEWHGGFTNVRTTVTVPFV |
Secondary structure | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLEEEEEELLLLEEEEEEEEEEEL |
PRMN | - |
PiMo | - |