NONHSAT056567
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056567 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
759 nt |
Genomic location |
chr17-:79804796..79805724 |
Exon number |
2 |
Exons |
79804796..79804948,79805119..79805724 |
Genome context |
|
Sequence |
000001 aaaattagcc aggcatggtg gcaggcgcct gtagtcctag ctactcggga ggctaaggca ggaaaatcac ttgaacctgg 000080
000081 gaggcagagg ttgcagtgag ccaagatcat gccactgcac tccagcctgg gcaacagagc gagactgtct caaaaacaaa 000160 000161 taaaaaagaa aatagctttg accacatggg tgccctgaaa aggctagggg ccctggggat gggccacact tcaagGTTGC 000240 000241 TGGAGGACCA CGTGCGCCAG GCTTGCATTG TGGATGTGAA GCCAGCTGTT GAATTCACGG GCAGCCATAA GGCCGTGACC 000320 000321 AGAGCCAGTC TTACTGTCGA GGAACAGCCA TGTCCTGTAC CCATTGCTGG ACCTGTGGCT CGAAACCCCA CGGGAGGGCA 000400 000401 GGGCTGCTGG CTGCTGTGAC TTCCCACGTC CAGGGAGACC CGGGCCCAGG GGCTGTGCTC CCAGCAGCAA TGCTCAGTCA 000480 000481 GGGCCCTCTT TCTGTCCACA GTTTGATGAA GGCCGGAACA ACTTTGAAGG GGAGGTCACC AAGGAGAACC TGCTGGACTT 000560 000561 TATCAAACAC AACCAGCTGC CCCTTGTCAT CGAGTTCACC GAGCAGACAG CCCCGAAGAT TTTTGGAGGT GAAATCAAGA 000640 000641 CTCACATCCT GCTGTTCTTG CCCAAGAGTG TGTCTGACTA TGACGGCAAA CTGAGCAACT TCAAAACAGC AGCCGAGAGC 000720 000721 TTCAAGGGCA AGGTGAGCTG CTCTTCTGGG TGGCTCGTG |
Predicted Small Protein
Name | NONHSAT056567_smProtein_185:418 |
Length | 78 |
Molecular weight | 8101.3555 |
Aromaticity | 0.025974025974 |
Instability index | 46.6597402597 |
Isoelectric point | 8.63446044922 |
Runs | 13 |
Runs residual | 0.0327498588368 |
Runs probability | 0.0495971084207 |
Amino acid sequence | MGALKRLGALGMGHTSRLLEDHVRQACIVDVKPAVEFTGSHKAVTRASLTVEEQPCPVPI AGPVARNPTGGQGCWLL |
Secondary structure | LLHHHHHHHLLLLHHHHHHHHHHLLEEEEELLLLEEELLLLLEEEEEEEEEEELLLLLLL LLLLLLLLLLLLEEEEL |
PRMN | - |
PiMo | - |