NONHSAT056889

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT056889

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1890 nt

Genomic location

chr18-:1268312..1359630

Exon number

4

Exons

1268312..1269853,1272443..1272512,1358727..1358761,1359388..1359630

Genome context

Sequence
000001 AATGCCTTAA AGAAAGGACT GATCTCCCCT GAAGAAGAGA GAATTCTGCC TCTAGATTGC TTACAATTTG AACTGGAACA 000080
000081 TCAGCTGTTC TCTAGGTCTT AAGTCTGCTG CTCTAACCTA CAAATTTTGG ACATGCCAAT CTCCACAGTC ACATGGGCCA 000160
000161 ATTCCTTAGT TTCTCTGGAG AATCCTGACT AATGTATGCA ATGTCTTTAT TTCATCCTCA TTCTTAAAGG ATATTTTCAT 000240
000241 CAGCAACACC ACACCCTCCT GATCACCATA GCTTTATGGA TGCAATTGTC CAATTATTGG TGAAATTGTC ATTTCATGCT 000320
000321 ATTGGCTATT TGAAATTCCT CCTCTAATTT CAGAATAAAT CACTGAAATT GACATCGGCC AGTCTGAATT TCAAGAAATT 000400
000401 ACCTGCTGAA GACAAGAGGG ATCTCTTCTT CAGATTTGCA GTCTGGGGAA GACACAGCCT CTACTGTACT TTAGAACCTG 000480
000481 AGATATGGTG GTGGAGGGAG CCCTGGGTCG AGTGGTAAGA TTCACCCTTA GGTTAGTATT GACGTAAGGT GACGAGGAGC 000560
000561 TGTAGACAAA AGATTGTAAC CATAAGAACT TCATAGTTTT TGTATTTTCA CCGAGCTTAT ATTTGGTGTG TTTTTTGTCT 000640
000641 TTTCTTTATG ATTATCAATA AAATGCTTGA AAGGAGATGA GGTTGGGGAA TAATTTTTGG GAATACCACA AAAGACACTT 000720
000721 TTGTGATGGA AATCCTTAAA AAGACACAAT CCATTACCTC ATTGGGTTCA AAAGGCAATT GTGAACTACT GTGGAGTTTG 000800
000801 GAAAGAAGCA ATGAGGTAAT CAAGGATACT GTTGACAATC TAGCTTATCC TATGGATGGA AGGAAATTGA AACTAATGGA 000880
000881 GGCGAGGCTG GTAAAACAAT AGGGTTTGAG ACAATTCTGT GGCATTAGAA ATGAAAGAGG AAGGTGAATC CGGGAGACGG 000960
000961 AGCTTGCAGT GAGCTGAGAT CGCGCCACTG CACTCCAGCC TGGGCGACAG AGCGAGACTC CATCTCAAAA AAAAAAAAAA 001040
001041 AGAAAGAAAG AAAAGAAAGA GGAAGTAATA ATCTGTGAAA TTTTTCCTTA GGAACTTATT GGCAATTTAA AAATGAATTT 001120
001121 GTTAAGCCAT GCTGGTTCTG ACCCAAAAGC CATTCCCCAG CCTTCCTCAC TCCCCTCTTT CACTACTGGC AGAGATTGTC 001200
001201 TCTCATTTTA CAAGCTGAAA ATGCCAGATG CTTGCTTTTA CAGTCTTCCT TACACCCAGA GCATGTGCAT ATGTTTAAAC 001280
001281 GGTCAAGAAG AAGTCATAAC ATGGGTGTCT GGGAGAGCTT TTATCCCACA AAAACAACAC TTCACTCAAA AAACAAACCA 001360
001361 AACAAAGAAA AATTCTCCTT CCTGCCATTG GATGTGAGGC TCAGACCTCT AGTAACCATT TTGTGACCAC AAAGCAACAA 001440
001441 GCCTGAGGAA AAGTCCTACA CGCTGAGCAA CAGGCAGAAA TATTGCCATC GCTGAGTTGC AGAAACAAAT CTAGAGATGT 001520
001521 TTTGCTTCTG TAATTATTTT TTATGGGAGA TTACAAGTGG GTTTACTGTT CACTTTTCAA ATCTTATTTC TCTATGATGT 001600
001601 TTAGCTTGGG TAAATTTTAC CTTAAATCCA CTTTTTTATG TAAGGTAACA TATTTGTCGG TTTCAAGGAT TAAGATGTGG 001680
001681 GCATACTTGG AGGCCATTAT TTTGCCCACC ACAGGTGAAA AAGGAAGTGT TATTCTTAAA TCATTTGGAA GGATCTCTGT 001760
001761 GTAAATGCAA GAGCGAGACA AGAAAATGCT GTCATTCTTT TGATATGGAC TCGAATTTCC ACTTCATGGT TGTCTGCTTC 001840
001841 CTTTTTAGAG TATTATTTAT CCTCCTAATA AAAAGAAAGT GAAATTTCCC
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Predicted Small Protein

Name NONHSAT056889_smProtein_1112:1396
Length 95
Molecular weight 10632.1342
Aromaticity 0.106382978723
Instability index 64.4778723404
Isoelectric point 8.91461181641
Runs 12
Runs residual 0.00115633672525
Runs probability 0.0353220867927
Amino acid sequence MNLLSHAGSDPKAIPQPSSLPSFTTGRDCLSFYKLKMPDACFYSLPYTQSMCICLNGQEE
VITWVSGRAFIPQKQHFTQKTNQTKKNSPSCHWM
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHEELLLLLEEEELLLLLLEEEEEELLLEE
EEEEEELLEEELLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -