NONHSAT056959

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT056959

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3409 nt

Genomic location

chr18-:2943213..2946621

Exon number

1

Exons

2943213..2946621

Genome context

Sequence
000001 AGACTGGTGC TAGCAACACG GGATTGGCTA ACGCATCCTC TTGCTGTTCC CGGTGTTTGG GCCTTGCCTG TGACAGTGGG 000080
000081 AAAAAAAATG GCCTTGCTGT GCTACAACCG GAGCTGCGGT CAGCGCTTCG ATCCTGAGAC CAATTCCGAC GATGCTTGCA 000160
000161 CATATCACCC AGGCGTTCCA GTCTTTCACG ATGCATTAAA GGGTTGGTCT TGCTGTAAGA GAAGAACAAC TGATTTTTCT 000240
000241 GATTTCTTAA GCATTGTAGG CTGTACAAAA GGTAGACATA ATAGTGAGAA GCCACCTGAG CCAGTCAAAC CTGAGGTCAA 000320
000321 GACTACTGAG GAGAAGGAAC TATCTGAATT AAAACCAAAA TTTCAGGAAC ACATTCAAGC CCCTAAGACA GTAGACGCGA 000400
000401 TAAAAAGACC AAGCCCAGAT GAACCAATGA CAAATTTGGA ATTAAAAATA TCTGCCTCCC TAAAACAAGC ACTTGATAAA 000480
000481 CTTAAACTGT CATCAGGGAA TGAAGAAAAT AAGAAAAGAA GACAATGATG AAATTAAGAT TGGGACCTCA TGTAAGAATG 000560
000561 GAGGGTGTTC AAAGACATAT CGGGGTCTAG AGAGTCTAGA AGAAGTCTGT GTATATCATT CTGGAGTACC TATTTTCCAT 000640
000641 GAGGGGACGA AATACTGGAG CTGTTGTAGA AGAAAAACTT CTGATTTTAA TACATTCTTA GACCAAGAGG GCTGTACAAA 000720
000721 AGAGAAACAT GTGGACTAAA AAAGATGCTG GGAAAAAAGT TGTTCCATGT AGACATGACT GGCATCAGAC TGGAGGTGAA 000800
000801 GTTACCATTT CAGTATAGGC TAAAAATTCA CTTCCAGAAC TTAGTCGAGT AGAAGCAAAT AGCACATTGT TAGATGCGCA 000880
000881 TATTGTATTT GAAGGAGAGA AGGAATTTGA TCAAAATGTG AAATTATGGG GTGTGATTGA TGTAAAGCGA AGTTATTAAC 000960
000961 TATGACTGCA ACAAAGATTG AAATCACTAT GAGAAAAGCT GAACCGATGC AGTGGGCAAG CCTTGAACTG CCTGCAGCTA 001040
001041 AAAAGCAGGA AAAACAAAAA GACGACACAG CAGATTGAGT GGGAGATGGG AGGAAGGCTA TTACGTATTT CAGAATTTTT 001120
001121 AATACTGTGT GAAGTGGTGG CTTGCTGCTG TCATCTTTTG TTTTGTTGTT GTGTTACTGA ATGTGGCATT TCAGGGTTAA 001200
001201 CATTAGGTTC TTAAAAGCCA AAGTCAGTTT ATCTTTTTGT GCCTCTCATC TTTCTTTCGT GTTATGTAAG ATTGATTATT 001280
001281 CGTTTCTCCC TACTGGTAGG AACCATAGTT GTGTCCTGTA CTTGAAGAGG CTGAAAAATA GCCCATAACC ATAATTGCAG 001360
001361 TATTTCTTTG TATTTCTCTG TTAAGCAAAG AAATATTAAG GAACTTTTTT TATGTCTTTG TATTATTCCA TAATTAGTAA 001440
001441 AGCTAATTGT GAATGTCCAA TTTTAATGAA ATGTCCAATT TTAATCAGTT TTTTTCATGG ATTTGTGTTC TTACGGTACT 001520
001521 TGAAAATATT TAAGGAAGAG ATGAAGCTCT GCAGTTTTTT CTATGTGGGA TGATTGCTTT TTTAAGGAGG ATTAATTCTG 001600
001601 AGGTAGTATA GTAAGTAAAG GGGAATATAT GAATTGTTAA CAAATTAGGA TTTGTTTACA ACTACTTGAA TTTTTAAATT 001680
001681 ATGTCAAAAC TTACATTACT TGCCAAGCAG TATGATGTAA GAGTATAGGA AACATAAATA AGAATACAGA GGTATCAATT 001760
001761 TGATTAAAAT TCACCATTTT ATAAGACTAA GCAATAATCT TAAAAACCTC TTTCCTGAAT ATTTAAATGT GTTTGTATGG 001840
001841 TGTTATGACT AATTGTTACT GATTTACAGA CTAAGCCCTC TTAAAACCTT TAGTTAAATA TAAAAAGAAA TTATATATAT 001920
001921 CTTGCCTCCC TGATGGAAAA CTATGTAAAA TTGTAGACTT AAAAGGTTTG TGGAGGCCGG GCGCGGTGGC TCATGCCTGT 002000
002001 AATCCCAGCA CTTTGGGAGG CCGAGGCGGG CAGATCACGA GGTCAGGAGA TCGAGACCAT CCTGGCTAAC ACGGTGAAAC 002080
002081 CCCGTCTCTA CTAGAAATAC AAAAATTAGC TGGGCGTAGT GGTGGGTGCC TGTAGTCCCA GCTACTCAGG AGGCTGAGGC 002160
002161 AGGAGAATGG CGTGAACCTA AGAGGCGGAG CTGGCAGTGA GCTGAGATTG CGCCACTGCA CTCCAGCCTG GGCGACAGAG 002240
002241 CCAGACTCCG ACTCAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA GTTTGTGGAA ATACATTAGG ATATCAGAAA 002320
002321 ACTAAATATA TGGAGTTGCT TTATGACTAT TACATGTTAA ATAAAATAGC TTGTTTTGGA GTTTTTTTTT TTAAAGTCAT 002400
002401 GAAGAGCTTC ACAATTCTAG TGATACAGTG TTGATTATAT ATTGTGCTTT ATTTATTTTA AATATAGGTA ACACAGAATT 002480
002481 AGATCGTTTG GATAGGTTTT GATGCAGTGC AGAGCTTAAG AAGAAAAATT AGGAAATATT CTGAAGGCCA GAACTCTGGA 002560
002561 AGAACTTAGA AAGTTTGGGA ATAAATTAAA CTTACATAGA TTTAAAATTA AAAGGGGTTT ATTTCCCAAA CCCCTTGAGT 002640
002641 CTTTTCTTTT CCTTGGCATT TGCGGAATTC TTACAAAGAA AAATTTACAG AAGTACTATT TTCGTTAATA AAGCATATAT 002720
002721 ATCATTCTAC TACCATTAGC AAATAACTTA GTTGTAGTTA ATATAATTGT TAAAAGGTTT AGCTCTGTTA CAAATAAAAA 002800
002801 CAAAAAGATC TGGCAACCAG ACTCATGATG TTACACTACC ATGACAAGAA ACTCTGGGCA GTGAAAGTTG GACCCACATG 002880
002881 GAGTACATAA ACATCTGATA CTGGGAGATG TATTTAAAAT TTTTCAAGTT ATATTCCATG ATTTAGGAAC CATTTAGAGA 002960
002961 CATGAAGTCT TTATGGGTTG GGGGAAAGGT TGATACTTAG TTTGATTAAA GGTAATGATT AATATGCCTT TTTGTTAATA 003040
003041 CTTCTTTCTG AGGCTGTCTT CCCCTAAACA GTATCTTAAT CTGTTAAATG TAATTGAAAT ATTATTTGAA GCAGTGAGTT 003120
003121 ATTGTAACCT CAGATTAGTT ACATTGATCA AAACATTGAT TTATACACAC ACACACACAC ACACACACAC ACACGCAGCT 003200
003201 TTTATATTTA GTCTGGTTAC ATTAGTGACC ATGGTATTTC CTTTCTTACT TCTTAAGGAG CCTTTGAATT TCTTGTCCAG 003280
003281 ATAAAAATCT GAATAATATT TATCTTAGAC TCATACATAA AGGGACACAG TTACCGTTAG GTAGCATATG TTTTACTATC 003360
003361 GGTTTGTCAA AAAAGTTAAT AAAAAATGCT TATTGATTTG TTTCTCTAA
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Predicted Small Protein

Name NONHSAT056959_smProtein_1085:1213
Length 43
Molecular weight 4467.4555
Aromaticity 0.047619047619
Instability index 53.8904761905
Isoelectric point 5.47589111328
Runs 9
Runs residual 0.038125376733
Runs probability 0.0336905532984
Amino acid sequence MGGRLLRISEFLILCEVVACCCHLLFCCCVTECGISGLTLGS
Secondary structure LLLLLHHHHHHHHHHHHHHHHLLLEEEEEEELLLEEELEELL
PRMN LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL
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