NONHSAT056973
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056973 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
565 nt |
Genomic location |
chr18+:3247799..3253686 |
Exon number |
2 |
Exons |
3247799..3247907,3253231..3253686 |
Genome context |
|
Sequence |
000001 AAGCAGAGGC CGGAAGCGGT GGTTTTTAGC GGCTCTCTGG GTAGCAGGGT GGTGTGATAG CGGCAGCGAG GGGCTCGGAG 000080
000081 AGGTGCTCGG ATTCTCGTAG CTGTGCCGGG ACTTAACCAC CACCATGTCG AGCAAAAGAA CAAAGACCAA GACCAAGAAG 000160 000161 CGCCCTCAGC GTGCAACATC CAATGTGTTT GCTATGTTTG ACCAGTCACA GATTCAGGAG TTCAAAGAGG CCTTCAACAT 000240 000241 GATTGATCAG AACAGAGATG GTTTCATCGA CAAGGAAGAT TTGCATGATA TGCTTGCTTC ATTGGGTAAT GCTCAGTTTA 000320 000321 AATATTAATC TATTGGATAG AATTTCCATG GTGCCTTTCA TCTTGATTTC ATGAGTCTTA AAGCTCTGTA AAGCCTGTCT 000400 000401 AATGAGTCTA CTAAGGTTTG AGTAAAGTGT GGAACAGTGT TTCCCACCGG ATCACCAGCA GATTCGTGAC CCTGTCTTAG 000480 000481 GATTGGGTTG GGGTTCGTGT GTGTGTGTGT GTGTATAAAA ACACTGATCT TGATTATGGA AGCAGTATTA TTCCTTCTGA 000560 000561 CATTC |
Predicted Small Protein
Name | NONHSAT056973_smProtein_257:373 |
Length | 39 |
Molecular weight | 4405.4918 |
Aromaticity | 0.0526315789474 |
Instability index | 48.0105263158 |
Isoelectric point | 8.93963623047 |
Runs | 5 |
Runs residual | 0.0410318559557 |
Runs probability | 0.0266560678326 |
Amino acid sequence | MVSSTRKICMICLLHWVMLSLNINLLDRISMVPFILIS |
Secondary structure | LLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLEEEL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLL |
PiMo | iiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTooo |