NONHSAT056980

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT056980

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2609 nt

Genomic location

chr18-:3347675..3383509

Exon number

8

Exons

3347675..3347986,3348131..3348615,3357285..3357307,3357313..3358623,3365895..3365924,3368559..3368686,3369929..3370107,3383369..3383509

Genome context

Sequence
000001 TTACAACAAC TTTGTATGAG CTCACTTCCC ATCCCTCTTT TTTGCCTTTA AAAACTTGCT TGTAACAAAG GCTGGGCGGA 000080
000081 GCTCACATTC AACGTTTCTT GGGTCTAAAT CTTCCGGGCA GCTGTCTACA CTTTGGCTCA GATAGGGTCT TGTTCTGTCA 000160
000161 CCCAGGCTGG AGTGCAGGGG CATGATCACT GCTCACCCCA ACGTCAACCT CCTGGATTCA ACTGATCCTC CCAATTGAAT 000240
000241 GATTGTTCTG AAATACCCTC TGCAGGACTC CTTTGTGATA TTCATCAAAT ATTTCTTGCT CTCCACCCTC CAGACACATG 000320
000321 TGATTTTCAT GGTGTGATAT ATAGTCAACC CCACATCAGA TCACCTGGAA TCATTGTCGA TATTGGGTAC AACTTGCCTC 000400
000401 ACCCCAGAAT TTCAAGGAGT GTGACCTGCG AGTCTGTATT TTTACCAGGT ACCATCTGCT GACTTCCCAC ATCAGAAGCA 000480
000481 GAATGATCTT CAACCCAAGA CACAGGCAAA GAGAGCATCT AACTGCTTAA AATGAGAGCA GGAATGGCTG TTGGCTTAGA 000560
000561 TAGATGGCAC CCCAGAGTCC TGAAAGAACT TGCAGATGTG ATCACAGGAC CATCTGAACC GGAGAAACCG GGGGGAATGG 000640
000641 AGAGACAGCA AAAGACCGGA GATGGGTAAA TGAGTTCCAG ATTTTCCAAC ACAACAGGAA AGGTGACTTA CGGGTCTGTG 000720
000721 TGCTGGTTAC ATTTAATGTT GAGCTTCAGC AAAACTCCGG AACAGATGAT TGAAGGGGCT TTGTGCGTAT TTATTAAAGA 000800
000801 AAGTAATGAT TGCTAGGCAC TCTCATGAGT TCCCCGAAAT CTGAGCTCGT GCCAGACAAC CTTGTTTCCA TGCCATAGCA 000880
000881 CTCCACTGGA CGAGCAGGAA AATATCATAG TCAGAAATGA CTTATTTTAG CAAGACACTT AGCAAAAGTC TCACGTGACA 000960
000961 TCCTTGTGGA CCGAGGAATG TGGACTGGTG GTTGCTTTGT GTCCACATTT CAGGGGACCC ACTCAGGGTC CTCCTTAGGC 001040
001041 CCCTGTCTCT ACACGAAACC TCAGCCACAA AGGTGCAAGG GAAATAAACT GACTGTCACA GAGACAATTG CTAATGAACT 001120
001121 TTTAAAAAAC GAATGACTTA TTTTTTAAAA TTTTTATTTT TCAATTAACA GAACTAAATT TATTCTCAAT GTTATAACTA 001200
001201 TGGAAAATGG AAAAAATTGC TACCTCTTAC TTTCTTATTC CTTTTAATTG AATATATTTG AGGTGTACAG CATATTTTCA 001280
001281 TATACTTACC TTTTTTTTTT TCCGTGAGAG ACAGAGCCTC ACTCTGTTGT CTAGGCTGGA GCATAGCAGT GCAACCATGG 001360
001361 CTCACTGCTG CCTCCAACTC CTGGGCTCAG GTGATCCTCC CACCTTAGCG CCCCCGAGTA GCTGAGACTA CAGGCACATG 001440
001441 CCACCACATC CAACTAATTT TTTTTTCTGT AGAGACAATC CTCCTGCCTC AGCTTCCCAA GGAGCTGGGA CTATGGACAC 001520
001521 GCACCACCAT GCTCAGCTGA TTTTTAAATT TTTTGTAGAG ACGGGGTCTC ACTGTATTTC CCAGGAGTGT CTTGAACTCC 001600
001601 TGGACTCAAG CAATCCTCTG CCTTTGCCTC CCAAAGTGTT GGGATTTCAG GCATGAGCTA CTGTGCCTGG CCAATATACT 001680
001681 TATCTTGATA TGCATATACA TAGTGAGGTG GTCACTATAG TCAAGTAAAT TGATATACTG GTACATTATC TCTATAGCTA 001760
001761 CTTTTCCTCT GTATGTGTGT GTGTGTGTGA GTACCTAAAA TCTACTCTCT TGCTTCAGGG TATAATGAGG TAGGAAGGCT 001840
001841 TAGTCATCTA GGGAAACTAT ACCATGTACT TATTATCTTT TTAGTGTTGG GATTAGGGTT GCCAGATAAA ATACAGGATG 001920
001921 CCCCACTAAA TTTGAATTGC TAAACAACAG GGACATACTT AGACACAAAC ATTATTCAGT GTTTATCTGA AATTCAAATT 002000
002001 CCGCTGGGTG TCAGGCATTT CTGTTTGCCA ACTCCAGCAG CCCCAGCTGG GAGGTGCCCT CTGAGCTCCT CTCCCTGGAA 002080
002081 GTCCTCTTAC CTGCTGTCAG CTGAGCAATT TGCCAGGCTT GCTTTGGGAG CTGGCTTGAA GTTATTTGGA TTTGATGACT 002160
002161 CTCTTTCTCT TCTGTACAGG AATCTACTTA CCAAGATGGC AGGAGCAAGT GGTTATCAGA GCCTGCTCTC TAGAAATACA 002240
002241 ATTAAACAAG CAGCCCCTGT CTCTTTTTCT CCACTTTCAG TCTTGGGGAA GGGATTGGAA TATGTGAGCA GGAGAGAAGG 002320
002321 GTCATGTTGG AGCAGCCAGG ACTCAGAGCC TTTCCGCAGA CTGAGTCTGG ATCCTTTCCT TCAGCCTCCA GGAATACTCC 002400
002401 CGGCTCCACA CCCAGAATGG TAATCCAGGC AAGGGCTCTG GTGTGTGGCC ACACTGCCAC CTATTACCTG CGGGTCCAAA 002480
002481 TGCAGTGACT CAACTTCTCT GTGCCTCTCT TTCCACATGT ATAAAATGAG GATAATGTTG CTATTGTAAG AATTGCATCA 002560
002561 ATTAATAAAC AGCACTCAGT GAATCTGTTA GCCCATCAGT GGATCGCGC
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Predicted Small Protein

Name NONHSAT056980_smProtein_2195:2422
Length 76
Molecular weight 8200.1966
Aromaticity 0.0933333333333
Instability index 93.3813333333
Isoelectric point 7.94073486328
Runs 9
Runs residual 0.0289361702128
Runs probability 0.0397652554516
Amino acid sequence MAGASGYQSLLSRNTIKQAAPVSFSPLSVLGKGLEYVSRREGSCWSSQDSEPFRRLSLDP
FLQPPGILPAPHPEW
Secondary structure LLLLLLLLLLLLLLHHHHLLLLLLLLHHHLLLLEEEEELLLLLEELLLLLLLLLLLLLLL
LLLLLLLLLLLLLLL
PRMN -
PiMo -