NONHSAT056982
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056982 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
425 nt |
Genomic location |
chr18-:3347717..3350521 |
Exon number |
3 |
Exons |
3347717..3347986,3348131..3348248,3350485..3350521 |
Genome context |
|
Sequence |
000001 CCCGCTCCTC TCCAGCTCTC TCTTTAGGGA CAGAGAGGAA TCTACTTACC AAGATGGCAG GAGCAAGTGG TTATCAGAGC 000080
000081 CTGCTCTCTA GAAATACAAT TAAACAAGCA GCCCCTGTCT CTTTTTCTCC ACTTTCAGTC TTGGGGAAGG GATTGGAATA 000160 000161 TGTGAGCAGG AGAGAAGGGT CATGTTGGAG CAGCCAGGAC TCAGAGCCTT TCCGCAGACT GAGTCTGGAT CCTTTCCTTC 000240 000241 AGCCTCCAGG AATACTCCCG GCTCCACACC CAGAATGGTA ATCCAGGCAA GGGCTCTGGT GTGTGGCCAC Actgccacct 000320 000321 attacctgcg ggtccaaatg cagtgactca acttctctgt gcctctcttt ccacatgtat aaaatgagga taatGTTGCT 000400 000401 ATTGTAAGAA TTGCATCAAT TAATA |
Predicted Small Protein
Name | NONHSAT056982_smProtein_53:280 |
Length | 76 |
Molecular weight | 8200.1966 |
Aromaticity | 0.0933333333333 |
Instability index | 93.3813333333 |
Isoelectric point | 7.94073486328 |
Runs | 9 |
Runs residual | 0.0289361702128 |
Runs probability | 0.0397652554516 |
Amino acid sequence | MAGASGYQSLLSRNTIKQAAPVSFSPLSVLGKGLEYVSRREGSCWSSQDSEPFRRLSLDP FLQPPGILPAPHPEW |
Secondary structure | LLLLLLLLLLLLLLHHHHLLLLLLLLHHHLLLLEEEEELLLLLEELLLLLLLLLLLLLLL LLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |