NONHSAT057010
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT057010 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1917 nt |
Genomic location |
chr18+:3604968..3606884 |
Exon number |
1 |
Exons |
3604968..3606884 |
Genome context |
|
Sequence |
000001 ATTTGGAGAA ATACGTTTCT ACTTAGTCTC ACTGGGTCTG TCTTTTCTGT TTCCAAACTA TTGTGTACAC TTAGAGGAAG 000080
000081 AGTGGAAACC CTCCAGCAGG TCCTGTCAGT CTGCAGTTTA CAAATCTCCC CTCAGGATAA GAGTTCCTAT TCACCCTTTT 000160 000161 CAGGTCTCAG AATTCTGCCT CCTCCTGACC ACTTTTCCTT TAGTTATTCA ACCCATCAAG TTCCCTGGGT TTGCATGTGC 000240 000241 AATCGATTCC TCGTTAGGGA TATTCTTTCC TCTGGTTTTT CCTTCAGATA CGAGCTTACG TTCGACCTCT TCCAAGAAGA 000320 000321 CGTCAGGAAT GTCCTTCTGA ATGCCTTTCC TAGTTCTCAT GAGAACACAG CAGTTTTTAA TCAGGCAGAG CACTTATTAC 000400 000401 ATTATAATTA TCTTCTTGGT TCCCAACTGA ACTTTTAAGT TCCAAGTGGG CAGTCAGTAA ATATTTCTTG GTGCATCAAA 000480 000481 TGCTCCACAT TTTACACAGT TAACGTTTGC TGCCTACAAA CCAATTTGGA TAGTTACTTT AAAGTATCTT ATCTCTAGTT 000560 000561 CTCAAAGCTT TAGTTTCCTT TAACACTTAA GTATCTCTTG CATATTTTCT TTTCAAACAC TGCTTCGTTA ATTTGCAAAT 000640 000641 TCATTGGACT CCTTTCCTTA AAAATCAAAA TAATAAAACT TCAAGAAAGC TGTTGTGACT TCTGGCCTCT CTGAATGTCA 000720 000721 GATCTGTAAA CAGGAAGGGC AGAACTCTGA TCTCTAAAAT CCTCTCCAGT CCACTACTCT GACCCTCTAA CTTGAGCTTT 000800 000801 CTCCAGAGAG GTTAAGTGAC TTTTCCAAGG TCACGGAGCT TTTTAGCGGC AGGAGATTTT TTTTGCCTGT CTATAGATTT 000880 000881 TTAAAAGCTA GCCGTAAACA AAAACCAAAA AGTTTACCGA GGACACTGAG TGCCACTAAC AAGTTTGTGT GAAAGAGAAT 000960 000961 TCATGAAGAA ATAGGAGACT TCAAACAAAA CACTAAAATC AACAACAACC ATAATGGATT CCTGCCTAGG CAGGTCGGGA 001040 001041 CATTAAGAAA AAAAAAGGTC TCGCTGTGGT TTGCTATTAG ATGGAGAGAT ATTCAGATTT CATTTTTAAA ATGAAAGTGA 001120 001121 AAGATTAAAG AATTTTGGCA TCCTGACCCT TTGTAGAGGC CATTCCTCAG AGGCACAGTG TGCAGACAAA ACTATCCTAG 001200 001201 AGGTGCCAAC CAGAACAAGC TCTAATGTCT GTCTCATTCC TGAGCCTTGG TGCCTTGACG AGTCACCACG CTCAGGAAGA 001280 001281 AAGCTGCAAC TCGCCAGGAT GAAACTGGGC CCCGCTTCTT AGAACCCTTC CCCGCTTCCT TCCCCTGCCA GAACCACACT 001360 001361 AAAGAATTCG CTGCTCTCAA AGACAGACGT TTTCATTACT TCCTTACATT ATAGAGTTTG GGCTTAGATA ACCAGTTGTA 001440 001441 TGAGTAGTAA GTCAAACAGA AATACAACAG CAATAATACT TATTTCTTTC CCTAATTGTA ATATGTTGTA CTTCATAAGC 001520 001521 CATCATATGC ATTTGTTGCT TTTCCCCCTT CTACACTGAC CAGTAGTTTT GCTTTGTTTG ACAGAAAAGT ATAGTAAGAA 001600 001601 GAAACTGAAT TTGAAGTGGA TTCTTACAAA GGAAAAAGAA AATCACTATT GTAACTATAC CAAATTACTA TGTATGTGAG 001680 001681 CTCCCAGCTT TGACATCAAG TCGTTACAGC CACGTAATGG GATTACGGGT GATTTTTACT TTATTCTTTG GGCTTCTCTG 001760 001761 AATTTTCCTA TATTTTGAAA AAGCACCTGC ATTATTTTGT AATTATAAAA AAGTATAAAT AAGAATTATA CACACTATTA 001840 001841 TTTCTTCACT GCTATGACAT GACTAGATTA CAATTTTTTT CTTTTTGAGA TGACTTTCGG TCTTGTTTCC CAGGCTG |
Predicted Small Protein
Name | NONHSAT057010_smProtein_1439:1558 |
Length | 40 |
Molecular weight | 4556.4026 |
Aromaticity | 0.102564102564 |
Instability index | 55.7 |
Isoelectric point | 9.30523681641 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.0984278396043 |
Amino acid sequence | MSSKSNRNTTAIILISFPNCNMLYFISHHMHLLLFPLLH |
Secondary structure | LLLLLLLLLEEEEEEELLLHHHHHHHHHHHHHHHLLLLL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | iiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooo |