NONHSAT057070

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT057070

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2434 nt

Genomic location

chr18+:5239980..5242413

Exon number

1

Exons

5239980..5242413

Genome context

Sequence
000001 AGCAGCGTTT TTTTTTTTCC TCCATAGTAA AAAACCTACA GGATACCACC ACCAAAGGAA AAAACAAGTT TTTTTCAGTA 000080
000081 AACCTCACAA GAGCATACAT TTGATAGAAT ACACGGATTT TCTAATGAAA GCTCGCCGTC ACCATTTTAT AAGTCAGAAC 000160
000161 ATGAAAGTCA AAATATCTCA TACAGATGTC TTTTTTTTTT GAGAAGGTAC ACAAGGCTTG CTTGTAGAGA TGGAGTTACA 000240
000241 TGGAGGGACA GAAGGTCACT GGTCAGTGAT TTTAGGTTTT TATACTTCTG AAAACAGGTA ATTACAGATT CTGATCAGTT 000320
000321 TATCATTTTC TTTAGTCTTT TATTTTCTGC TGAATGCTCT CAAGGGAACG GATCCATACC TGTTTATCAG GCTCACCTGG 000400
000401 AAGAGCCAAG TCATCCACTC AGGTCTTCCT CTGGACCTGC ATAATTTCCT CATTTACTAG ATTGGGTTTC TTTTATGTGT 000480
000481 GGGCTTTTAA TGCTTGGTAT CTCTGGTCTT CCTAATATGT AATGCTTAGC ATAATAATTT TAGCCATTAT TCATTTTTGT 000560
000561 AGTAGGCTTC ACTAGCTTCC TGCTTCTCAA ATCCCTTGAA AAGATGAGAT TTTTTTTTCG TGGAGTTCAC GTCTAGTAAG 000640
000641 TTGGTCTTGA TTTTTTTTTT CTTTCAGAAC CTTCTGGATT TCAGCTTTGG CAAGCTTCCT CTGTTTCTGA GACACCTCCA 000720
000721 TCACCTGGGT TACAATCCCA TCCATGATTT TCCCCATCTC CAGGCATTTT TCATGGAAAG CTCCTCATGC TTTTTAATTC 000800
000801 CAGTTTATCC ATTTGTGTGG CTTTAACCTC CACATCCAGG TCTTTCTGGC TAAACTGCAG TATATCCACA ATGGGGCCAA 000880
000881 TGGACACATA AGGGAGGCCC TATCACAGGA ACACGAACAC CCGGAGTCGC TAGAAATCAG ATTCCACCGG CTTTGCTTCA 000960
000961 GGCCGACTTC CTAAGGAAGG CATGGTAGCA TCACAGATGC TGTTTGTCTC AGTTTCCTGA GAAGCCAGTT TCTTAGAGCT 001040
001041 GTCATTCAAG AGTGGGTCAA ATTTGAGATA TAAAAACCTT TCTCAAGGTA GACTCTTTGG CCCCTATGCC TAGTATGTCA 001120
001121 GCTGGGCCTC TGAAGCTCTC CTCTTTGAGG TCCTGGCAGG CTCTGGCCCC TGTTGAGAAG GGGAAGCAGT CATGTGAACT 001200
001201 CATGTGCTGG AAGAATCCAC TCTACCCCTT CCCTGGCTTC TCTGCTGCAA TTTTTGTCTT TAAACGTATT TTCAGGTGAT 001280
001281 TCCAGTTTGC ATACATAATT GAGAAATATA AGATTTGGTC CCCAGTAGAG AGCCAGGTGA ACTTAAGAAG GAGTCCATCT 001360
001361 AAGAAAATTG CACAATTATC TAGTTTCACT TGGGTTTAGC TTTTATGGCT TACTTGATTT AGTAATCAAA TGATTTTCAA 001440
001441 ATGATTTTGA TCAGGTGACT CTTCGTAAAC TAGAGAATGA ACTTGAGAGC CGAATTAGCA CAGTTTAAAA ATAATCATTT 001520
001521 AGTTTTTGTT CTCTATTGTG TAAATTATTG AGGTTTGACT GTCTTGGCTA AACTAAGGCT CATCTAATAT CTTTATTTTT 001600
001601 GATATCCTAA TTTCTTGCCA ATTAATTGAA GGTAACATAC TAGCAGACCA GATAACTACT TATGCAAACC TCAGATAACC 001680
001681 ACTAATTTAA ACAAAATTAA ATCCTTTGCC TTCCCCAGAT CCTTTGCACA TGGCCTGCTA TCAACAATCC TCTACAATGA 001760
001761 TTCtcagcat cacctaggga gcttatgtaa aatctcaaat tcctgggccc tatccccaga gtttcttatc aagtaagtct 001840
001841 gcattgggat ctgaggattt gcatctctaa caaaaattcc taggcgatgc tcacactgtt ggtgtaaggg tgagtacaaa 001920
001921 ttagaaataa aactatttaa ttctgcctgg tgcaaaggag agagagagac ttttaccctc cacatccttt tctttggtca 002000
002001 tttactttag gaaacttaat tgtaagcttt ttctgtgcct ctttgaaatg cctgtaaatc tttccaaaaa ctaaattagg 002080
002081 cttttgccaa ttttacaacc taagaatgtg aattcctcaa ggacctggga gctatctcac tgaaatttaa tcattgagaa 002160
002161 aaatagtacc cctatctttc agcttcctgg aaacataaga gcctaacttt attaggcacc ttgctccatt acaaagctat 002240
002241 cttctgtcat aaagatacaa gaaatttatt tttcccttgg acaaaagcaa ctaactagca gagggtcacc aaaattacca 002320
002321 ggtgaattta gggtgaactc tgtgtgacaa atggtgctgc caagttctct tgagtactaT AGAAAGTGCA TGACATGAAT 002400
002401 TTTTTACTTC ATGATGGTGC AAaaccattg cttt
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Predicted Small Protein

Name NONHSAT057070_smProtein_353:514
Length 54
Molecular weight 6197.0892
Aromaticity 0.207547169811
Instability index 43.7473584906
Isoelectric point 9.83990478516
Runs 8
Runs residual 0.00931891394386
Runs probability 0.0729221868928
Amino acid sequence MLSRERIHTCLSGSPGRAKSSTQVFLWTCIISSFTRLGFFYVWAFNAWYLWSS
Secondary structure LLLLLLEEEELLLLLLLLLLLLEEEEEEEEEHHHHHLLLLLHHHHHHHHHHLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTToooooo