NONHSAT057071
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT057071 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
913 nt |
Genomic location |
chr18-:5240254..5241166 |
Exon number |
1 |
Exons |
5240254..5241166 |
Genome context |
|
Sequence |
000001 GCTTCCCCTT CTCAACAGGG GCCAGAGCCT GCCAGGACCT CAAAGAGGAG AGCTTCAGAG GCCCAGCTGA CATACTAGGC 000080
000081 ATAGGGGCCA AAGAGTCTAC CTTGAGAAAG GTTTTTATAT CTCAAATTTG ACCCACTCTT GAATGACAGC TCTAAGAAAC 000160 000161 TGGCTTCTCA GGAAACTGAG ACAAACAGCA TCTGTGATGC TACCATGCCT TCCTTAGGAA GTCGGCCTGA AGCAAAGCCG 000240 000241 GTGGAATCTG ATTTCTAGCG ACTCCGGGTG TTCGTGTTCC TGTGATAGGG CCTCCCTTAT GTGTCCATTG GCCCCATTGT 000320 000321 GGATATACTG CAGTTTAGCC AGAAAGACCT GGATGTGGAG GTTAAAGCCA CACAAATGGA TAAACTGGAA TTAAAAAGCA 000400 000401 TGAGGAGCTT TCCATGAAAA ATGCCTGGAG ATGGGGAAAA TCATGGATGG GATTGTAACC CAGGTGATGG AGGTGTCTCA 000480 000481 GAAACAGAGG AAGCTTGCCA AAGCTGAAAT CCAGAAGGTT CTGAAAGAAA AAAAAAATCA AGACCAACTT ACTAGACGTG 000560 000561 AACTCCACGA AAAAAAAATC TCATCTTTTC AAGGGATTTG AGAAGCAGGA AGCTAGTGAA GCCTACTACA AAAATGAATA 000640 000641 ATGGCTAAAA TTATTATGCT AAGCATTACA TATTAGGAAG ACCAGAGATA CCAAGCATTA AAAGCCCACA CATAAAAGAA 000720 000721 ACCCAATCTA GTAAATGAGG AAATTATGCA GGTCCAGAGG AAGACCTGAG TGGATGACTT GGCTCTTCCA GGTGAGCCTG 000800 000801 ATAAACAGGT ATGGATCCGT TCCCTTGAGA GCATTCAGCA GAAAATAAAA GACTAAAGAA AATGATAAAC TGATCAGAAT 000880 000881 CTGTAATTAC CTGTTTTCAG AAGTATAAAA ACC |
Predicted Small Protein
Name | NONHSAT057071_smProtein_734:847 |
Length | 38 |
Molecular weight | 4527.3551 |
Aromaticity | 0.135135135135 |
Instability index | 40.1648648649 |
Isoelectric point | 11.8851928711 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0346228581522 |
Amino acid sequence | MRKLCRSRGRPEWMTWLFQVSLINRYGSVPLRAFSRK |
Secondary structure | LLHHHHLLLLHHHHHHHHHHHHHHHLLLLLLLEEELL |
PRMN | - |
PiMo | - |