NONHSAT057246

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT057246

Source

NONCODE4.0

Same with

,

Classification

sense

Length

917 nt

Genomic location

chr18+:9914049..9936586

Exon number

3

Exons

9914049..9914332,9931807..9931959,9936107..9936586

Genome context

Sequence
000001 TGGGGTTGAG TCAGTTGTGG GACCCGGAGC TGCTGACCCA GCGGGTGGCC CACCGAACCG GTGACACAGC GGCAGGCGTT 000080
000081 AGGGCTCGGG AGCCGCGAGC CTGGCCTCGT CCTAGAGCTC GGCCGAGCCG TCGCCGCCGT CGTCCCCCGC CCCCAGTCAG 000160
000161 CAAAccgccg ccgcgggcgc gcccccgcTC TGCGCTGTCT CTCCGATGGC GTCCGCCTCA GGGGCCATGG CGAAGCACGA 000240
000241 GCAGATCCTG GTCCTCGATC CGCCCACAGA CCTCAAATTC AAAGGCCCCT TCACAGATGT AGTCACTACA AATCTTAAAT 000320
000321 TGCGAAATCC ATCGGATAGA AAAGTGTGTT TCAAAGTGAA GACTACAGCA CCTCGCCGGT ACTGTGTGAG GCCCAACAGT 000400
000401 GGAATTATTG ACCCAGGGTC AACTGTGACT GTTTCAGTAA TGCTACAGCC CTTTGACTAT GATCCGAATG AAAAGAGTAA 000480
000481 ACACAAGTTT ATGGTACAGA CAATTTTTGC TCCACCAAAC ACTTCAGATA TGGAAGCTGT GGTAAGTATA GAAGAAGAAT 000560
000561 TTGTTTTGGG AAGTGGAGTT TAAACTGTGG GTGTTGTTTA GCAGTCAGTA GAAAAACTTA ATTTCTAAAA ACTAAAAGTT 000640
000641 AAATTTAGGT TTTTAAAAAA CTGCCAATTT CTTCATTATA GATAATCCTA ACTTAAAGAA TGAAAGAATT TTTAAATAGT 000720
000721 ATTTTTTTTT AGAAACAATT TAGAAATGCT GCTACTggcc tggtgcagtg gctcacacct gtaatcccag ccctttggga 000800
000801 ggccaagatg ggagtatctc aagcccagga gttcgagacc agctcaggcg acatgacaag accctgtctc tacaaaaaca 000880
000881 aacaaacaaa caaacaaaaa acaaaaaaaa ccaccac
[back to top]

Predicted Small Protein

Name NONHSAT057246_smProtein_458:544
Length 29
Molecular weight 3690.4345
Aromaticity 0.178571428571
Instability index 41.925
Isoelectric point 11.7339477539
Runs 5
Runs residual 0.0246478873239
Runs probability 0.0290231407879
Amino acid sequence MIRMKRVNTSLWYRQFLLHQTLQIWKLW
Secondary structure LEEEEELLLLHHHHHHHHHHHHHHHHHL
PRMN -
PiMo -