NONHSAT057246
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT057246 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
917 nt |
Genomic location |
chr18+:9914049..9936586 |
Exon number |
3 |
Exons |
9914049..9914332,9931807..9931959,9936107..9936586 |
Genome context |
|
Sequence |
000001 TGGGGTTGAG TCAGTTGTGG GACCCGGAGC TGCTGACCCA GCGGGTGGCC CACCGAACCG GTGACACAGC GGCAGGCGTT 000080
000081 AGGGCTCGGG AGCCGCGAGC CTGGCCTCGT CCTAGAGCTC GGCCGAGCCG TCGCCGCCGT CGTCCCCCGC CCCCAGTCAG 000160 000161 CAAAccgccg ccgcgggcgc gcccccgcTC TGCGCTGTCT CTCCGATGGC GTCCGCCTCA GGGGCCATGG CGAAGCACGA 000240 000241 GCAGATCCTG GTCCTCGATC CGCCCACAGA CCTCAAATTC AAAGGCCCCT TCACAGATGT AGTCACTACA AATCTTAAAT 000320 000321 TGCGAAATCC ATCGGATAGA AAAGTGTGTT TCAAAGTGAA GACTACAGCA CCTCGCCGGT ACTGTGTGAG GCCCAACAGT 000400 000401 GGAATTATTG ACCCAGGGTC AACTGTGACT GTTTCAGTAA TGCTACAGCC CTTTGACTAT GATCCGAATG AAAAGAGTAA 000480 000481 ACACAAGTTT ATGGTACAGA CAATTTTTGC TCCACCAAAC ACTTCAGATA TGGAAGCTGT GGTAAGTATA GAAGAAGAAT 000560 000561 TTGTTTTGGG AAGTGGAGTT TAAACTGTGG GTGTTGTTTA GCAGTCAGTA GAAAAACTTA ATTTCTAAAA ACTAAAAGTT 000640 000641 AAATTTAGGT TTTTAAAAAA CTGCCAATTT CTTCATTATA GATAATCCTA ACTTAAAGAA TGAAAGAATT TTTAAATAGT 000720 000721 ATTTTTTTTT AGAAACAATT TAGAAATGCT GCTACTggcc tggtgcagtg gctcacacct gtaatcccag ccctttggga 000800 000801 ggccaagatg ggagtatctc aagcccagga gttcgagacc agctcaggcg acatgacaag accctgtctc tacaaaaaca 000880 000881 aacaaacaaa caaacaaaaa acaaaaaaaa ccaccac |
Predicted Small Protein
Name | NONHSAT057246_smProtein_458:544 |
Length | 29 |
Molecular weight | 3690.4345 |
Aromaticity | 0.178571428571 |
Instability index | 41.925 |
Isoelectric point | 11.7339477539 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0290231407879 |
Amino acid sequence | MIRMKRVNTSLWYRQFLLHQTLQIWKLW |
Secondary structure | LEEEEELLLLHHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |