NONHSAT058101

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT058101

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3724 nt

Genomic location

chr18-:11666455..11670186

Exon number

2

Exons

11666455..11670156,11670179..11670186

Genome context

Sequence
000001 AGTTAGAGGG GAGGACAGTA ACCAGGGAAG GTTAGCGCCA GCAGGGCTGC ACGCCACAGG CTGGGGCTGG GGGAGAGGGA 000080
000081 AGGTACAGAG AGCGGCAAAC TGTCGAACTC CTTCCTCTTC ATGCTTCACG GTTCCCCAGC CACGTGTTTG GTGTAAATGA 000160
000161 GGAGGGCCGG AGGGGCCAGC CTGCAGGGTG GGTTCCAGTT GCCCTGAAAG GCAGGGAGCA GGCAGAGATA GAGTGCAGGG 000240
000241 CATGGCATTG GAGGCCCAGT CCACCCTGTT CACCCTCCTC TCCCACATCA GGCTGGCACT CTGCACATTT AGGGTGTGGC 000320
000321 CAAGCCTCAG CCAGCAGAAG CAAGTCTGGT CTTGCTGACC AGCCTGGCCG GCTGGCGGAG AAAAGGAGAA GACGGTGTCT 000400
000401 CTAGGGAGAT CCCGGGCCTG AGCGGCAGCG TCTGTCAAAT GTGTTTGGCT TCTGTCTCTT GAGTAGCCCA TCTGAAATGA 000480
000481 GGAAAGGGCC AAGGGGCCCC GGGGCTCAGG TCCACCACCC ACACTCCCAT TCTCACAGCC CTGCTGGACC AAGGCATCTC 000560
000561 TCAAGTGGGC CGCACTGGCC GTTTTTCTTG GTTGCTTGCC TGACTCCAAT CTACTCTCCA CAAAGCAGTT AGAATTAGAA 000640
000641 AACAGACGAA AGCCATGTCT GCCGCCAGCC CTGCTGTGCT GCCTGTGGCC AGCCACCCGC CCCAGACCCC ACAGCCATGG 000720
000721 CTGGTCACCT GCCTTAGGCT CCACAGCCCT GCTGGCTGGT CACCTGCCTC AGAACCCACA GTCAGTTCCT GCCTCCTGCA 000800
000801 GATGTCGTCT AGGGCTCAGC AAAAAGACCT CTCATTTTCC TATCTCACAG TGCCTCCCTG CCACGCTCTG GCTCTGTATC 000880
000881 CTCTTAATTT ATTTCTAGTC CTTATCATAA AGTATGAGCC TTTGTCTGTT CACAATCTGT TAGAGGCTCT GTGTTTTTCA 000960
000961 TCCACACTTA GCGTACATGT GTTGCAGAAG GTGCAAATTA GTCTTGTAGA AGAAAATAAA ATCTTGGGAC CCCGAAACTC 001040
001041 AGTATGCCAA AGGGAAAGTT AAGCTTGTGA AGTGAGTCAC ACAATACCAC CTTTCTTTTG TTCCCAGACA GACAGCTACA 001120
001121 ACTTCACGAC CCTGTGTCAT AGCCTCATCC ATCAGCCAGG TTCTCACATG GCCTCTGTCA CGAATTGCTC ACAAGGAAGT 001200
001201 GTAGCCATTT GTCTTAGTGC CTCCACTCCC TCCCTCCCTT CCTTCCTGCT GTTTTTTTTT CCCCTTTAAA TACTGAGTCT 001280
001281 CCACAACCTT CTTTGGAAAG CTCGGATTAC AGATACTCCT CTAACTCATG TTTTTCCTGG GCATATCACC AAACTCTGGT 001360
001361 TAAATAAACC TCTATCGATT GAGACTCCTG CCTCAGTCAC ATTTGGTTAG CAGACTCTGG CTTAAAAGTT TTGGCGACTT 001440
001441 TGACTTTTAT ATGCTGAAAC TACAGTGGCC AGTCAGATTT TGGGGGCTCC TGGCATTTCT GGCTCTTTAG CCTAATCTTT 001520
001521 TCCATACTGA CAGCTCTCTC TCTCTCTCTC TCTCTCTCAG ACCCCGCTGA CAAACTTGTT GCTACCAAAC ACAGCACTCT 001600
001601 AGTTTCTCTT TCTCTAAATT ATTTTCAGGA TTCATTTCGC CACTGAACTT TATTTTTACT GAATCACATG TCTTTTGTCG 001680
001681 ACAACTGATG TCTACCGAAG GCACAGGTGC TCCCTGGTTC AGGCATGGAT GTCTAATATC TCATGGACCC TGATGTTGTG 001760
001761 CTCCACATTG GTTTCTGATT TTGTTCTGTC ACTCCCCAAA GTGTGTTTGC TGAGATGCAG TAACCCATTC AACAAAATAT 001840
001841 TCTTTGCAAC AGGAATTGTT GCATTTTCTT ATAAATGTTT AGGTTTGGTG CTGGCCCTCG CACCCAAAGA CCATCAAGGG 001920
001921 AAGGTGAAAG AGCCACGGTT CCTGAGCCAC AGGCCCTGAG CTGGTATTTA GCTCTCTGTT TGCACAGCTT TGATGACAGT 002000
002001 GGCTTAGACA GGCCACCTCA CTATCTTGAC TGGCAAAACA GGAGCAGGGG GAGCCCAGCA CTGTCTTCTC TCTTGGAGGG 002080
002081 TTTTGCAGGG ATCAAATGAG ATAATGTCTG GGACAGTACT TTTGTAAAAG GCAAATAGTT AACACTAAGA CAGGTCCAGT 002160
002161 CTTTTATAAT TTAAAGTAGT GTGTAAATGG TATGTCCTCA GACGTTTGCC TGAGTGAACA AATCTAAGTG TTTTCTTTTG 002240
002241 CGCACTTAAT AAAGCTCACC TTTATGTCAG TCGTGATATA ACTGCCTATT TTTTTTCTGC CAGGGTATGT TACAACATCA 002320
002321 CACTTCCAAG CAAGGCCCAG GCTGGCCCAG ATGGGACACG AAGCCCCCAG TAAAGATCAG GAGCACTTCT GGGGGTCCCA 002400
002401 CCTGAGGGAT CTGGTGCATA AAGTCAGGCT TGGTTGTAGG CCCCCAACAA GACATAAAAC CTGTACAGGT CAAGAAGTGA 002480
002481 CGCATCTCTG GCCTGTGAGC CCCTCACGTG CTGGGTGGCA CTGAGGTGAT GATGACACTA TTTCTAAAAG ACAGACATAA 002560
002561 TGCCAGTGAC TTCAGTCATT TTCCTCATTT TATGTGGCTA TTTTTAAAAG CTGTCCTCCA GAAACAAAAG AATCCCTGAG 002640
002641 ATAAAATTTC CCAAAGCAAA ATGCTCCACC TGACTGGGGT CCGACCTAGG GGTGGGAGAG CTGGATAGTC CTGGGACACA 002720
002721 GAGTTAGGTC TGTGCTGTTA AAGGCAGAAT TAATATTCCT TGTACTGAAC TGAAAAGGAC AGATTTAAAA ATCGTATCTT 002800
002801 TTGTACTTCC ATCTAAGCTA CTTTAGGGAG TTTTCTGGCT ATGAAGCACC TGAATCTTGA GCTGTAATTC AGAAATAAAG 002880
002881 CGTATCTGCC CTTCTGTCCA CCTTTCTTTC CATCCTTCTG GAAAAAAGCA AAAGGAAAAT TCTTAACTTA CTAAAGAGAG 002960
002961 CATTAATGCA AACGTGAGTC TGAATGACAA TCAGATCAAT AGCCAATTTC AGAAAAAGCC TTCAGCATTT CTCTAAAGAG 003040
003041 AGGCAGAGGC AAGGCACGGT GGTGCTGTGA CTGCTTTGGT GGATAGGTGC TGGCACTATT TTCACTCCAG GAAAGCTGTG 003120
003121 CCTCCCCTTT GGGTGGGGAC GCATGAGGGG CCCTTGTGCT AAGCCACAAA ATATGCCAGC CCCTCGCAGG CAGACCCCAG 003200
003201 GCAGCACAGA TGTGGGATTT GTTTCCCACA GCATTTTAAG ACAGTTTGAA TTGGTTAGAG GCATTTTAAA ATGGGAAACT 003280
003281 TTCATACAAA AAAATTGTTT CTGGCTTCTC TGGAAAAGAC TAGAAGGCCT TGGGCGTGTG TGTCCCTGTG GTGAGAAGAG 003360
003361 GCTGGTTCTG AGGAACGGGC CCCAGAGTGC CCTGAGGCCG TGTCCTCTTT TCCTTAGAGA GGCTGACGGT GACAGCTTGG 003440
003441 GCCATTTTAT GTCTCCTGCC TGGTCCCTGT CGTTATTTGA ATTTGTGACC CTTGCTGCTG AGATCCTCCC CAAGAGAAGG 003520
003521 GTGGATGCAA CGAGGTTATT GCAGATTTTA AAAGTTGAAC TTTCTCGGTG GAGAGCCCAG ACAACACCCT TGGTAGCTGG 003600
003601 GAAGCCACAT GCTGGATGAG CTACAAGGGG CTCAAAACCT AGACTTTATA AAACTGACTT TTCTTTGTCA CTTTTCGGTG 003680
003681 TTTAATCAGA TGATTAAAGT CCTTGAAACA AAAAAAAAAA AAAA
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Predicted Small Protein

Name NONHSAT058101_smProtein_1874:2098
Length 75
Molecular weight 8302.214
Aromaticity 0.108108108108
Instability index 56.8648648649
Isoelectric point 7.97991943359
Runs 7
Runs residual 0.0480553724456
Runs probability 0.0446160446161
Amino acid sequence MFRFGAGPRTQRPSREGERATVPEPQALSWYLALCLHSFDDSGLDRPPHYLDWQNRSRGS
PALSSLLEGFAGIK
Secondary structure LEELLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL
HHHHHHHHHLLLLL
PRMN -
PiMo -