NONHSAT058426

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT058426

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

3824 nt

Genomic location

chr18+:13327065..13329979

Exon number

1

Exons

13327065..13329979

Genome context

Sequence
000001 TGCTTTCCTA GAAGTCAGTG TCTTGTCCTG GGCTGTTGCT TTTCTGCTTG ACTCCCTCTG TGGGCCGTGG ACTCTGCGGC 000080
000081 AGAGTCCTAT CTGCAGGGCT TCTGCATGGT TATCCATTGT CTTCTGAAGA AATGATGATG TTAGTGATGG AGCCACTTTG 000160
000161 GTTAGCGTTT TGTTAAGTAT GAACTTGTGA ATCCTTCCCA CAGCTGTGCA ATATTATTAC CTCCAGGGCA CAGCATCTGG 000240
000241 ACTTTAATTG ATGATGAGTG TATGTGGCCC CAAGGGACAT GGGGCCTCGA AATTAAGGAA GGAGCTGGAA GTAGTGGACA 000320
000321 AGCAGCAGCA CCACCACGTG GAAAGGTGAA AAGTTGGATA AGGACTGGCT GAGAAAATGC CATCAGAATA GCAAGAGGGG 000400
000401 GTCATTGTTG AAGAGCACAG CTTCAGGCAA GTCTTTGAAA TCAAAGCCAG ATTTCAAGGA AGTCGGAAGG AGCAGATGGA 000480
000481 GAGGAAGTGG AGAGATTTCC ATATGGTGCG TGTATTTTTT TTTTTAATTA AGGATTTTGG TGTTAAATGG AAGTGGTACT 000560
000561 TGATGGCCTA GCAGGATGAA ACAAAGTTTG TTTCTAAAGA TAGAGGGACA TGGGCTCACT TTTAAAGAGA AAGAAAGTAG 000640
000641 GTGGCCATTG AGTTATGAGA GGTTGAGAAG CCGGAGATGG TGGGCCCAGA GACCCACAGA GCAGGCTCTT TGAGAGCAGC 000720
000721 AGGTCTTCCT GCTCAGGGCC TTGCTGGTGC TGTCACGAGC CATATCCCCT GGCCTCCTGC TTTGCTTCTG GGCTGTCATC 000800
000801 AATCTGTTTT GTGGTGTTCT CTGAGAAATG AAATTAAATC CTAAGCTCCC AGCCAAATGA ATGGACCCCC TCTTGGCCAA 000880
000881 GGGGCACCCA AAGAAACCTT AGAACTGAGT CCTGGCTGTG ACAGGAGGGG AAACACGCCT CATGAGACCC CCACCTCGCT 000960
000961 GACCACCATC AGGCTCTCCT CCCTGCGGGC TAGAAGCTCC ATACTCATTT CAGCAACGGC CTGATGCTGT CCCTCCCTTT 001040
001041 TGTGGTTTTG ACCAAACAAC TAACCAGCAT TCTCTTCCTG ATACAAAGCC GCTGACCTTG GAGTGGTTCT GGTGAGTCTA 001120
001121 CAGAGGAGGC TCAGTGAGGG TTCTTGTGTC CTCTGCTTCA CCTTTTGATG TCACATGGCT AAAAACTCCA TCCTTGGATC 001200
001201 ATGCTCATGC CACCATTTTT TAAACATGGG TCCCACAGAC AGAGAGGCAT GAAGCTCAGT GTGCATGTGC CTGTTTCTCC 001280
001281 TTTCATAAAT ATTCATGACT CCTCCTAGAG CTCATTGAAT ATGCATATTT GGCAGCCCCA TTCAGCATAA ATCCCTGTCT 001360
001361 TATTCTTCCC ACCCTTGAAG TGCCTGTTTC TGGCTTCTGG CCGGAGGCTA CACTTCCCAG CCTGTCAGAA GAGCCACCTG 001440
001441 CAGGCTGCAG CCCTTTCTGA GAAATAATGC CCTCCTTTCC AAATGCATGA ACCTCATCAT TCTTCAGCTG ATATGTCCTT 001520
001521 ATCCCATGTA GAAGGAAGGA TCTTAGTGTT TATTGAGCGT CAACTTTGTA TAAGGCTCTG GGCTATCTTA TATGATTGTC 001600
001601 ACAATAATTT TAGAATATAT TAATGTGTTC ATTTATACCT TTAATTTTTA AAATTTGCGT TTTTAGTCAA GCAGCTCAAA 001680
001681 AAACATATAA AAAGATGTTT ATTGAAAAGT TTCCCTCCTA TGCCTATTCT CCATCCATCC AGTTCTCCCA CTTCCCAATA 001760
001761 TTTAGTTGTT TTTATTATTT TCTTGTGGAC ACATTCCAAA ATTTTAAGCA TATAAAATAA ACATAAAAAT ATTATTTATC 001840
001841 TTTTATGTAT AAGTTGTGGA GTCTATATAC ACTGTTTTAC ACCTTGCTTT GTTTCACTTA AAGTTTACCT TGGAAATCCT 001920
001921 CACATATCAG TTCACAGAGA GCAGCCTCAT TCTGTTTTAC AGTTGCATAG TTTTGACTGG ATTGAATGGA TACACCAGAT 002000
002001 TTTTTAACCC TGTGTTGTAT AAATAGATGT TTGAGTAGTT TGCAGTCATT ATATATTATG TACACATATT TTCCCACATG 002080
002081 TGAAAATGCA TTTGTAGGAT ACATTCCCAG AAGTGAAGTT GCTGGGTTAA GGGTATATTT ATTTGCAGTT TTGAGTGATT 002160
002161 ATTACTGAGG CCCATCTTTA GGCTTGCACC AGTTCACACA ATCATCAGCA ACATACTAGA GGCCTGTTTC TCTGCATCTT 002240
002241 TGCCAACAGA GCATGTTATC AGTTTTTTAA AGGTTTCTGT CAGCCTACTA GGAAAAAAAG TAATAGAGTT ATTTTAATTT 002320
002321 GCATTTATTT TTATTATGAG TGAGGTTGTC TTTCCACAGG TTTATGAGCT GTTTGTATTT CATTTTCTTT TACTGTCTGG 002400
002401 TCTTATTCCT TTCCTCTTTT CTGGCCAGAT CATTGGTCAT CTTGTAGATG ATGTGGTCAA ATCTATCAGT CTTTCCTTTT 002480
002481 GTGACTTCTG CATTTACAGT TACAGTTAGG GAGCATCTTT CAAAATTATA AAGGAATTCT TCCAGGTATT CTATTACTTT 002560
002561 TAGAAAGTCA TTTTTTTCAA ACAAGACAAA ATACCCAAAT CGTTTATCTT TGAAATTTAT CCTGCTGTGG TATGAGTTAC 002640
002641 GGATCCAATT TTCTCCCCTA AATGTTACCA ATTCCAATAT CATTTATTGC CTAATCTGTC TTTTACTCAC TGATTTGAAA 002720
002721 TGCTGCCTTT ACCATACACT GAATTTCTGT TTGCATTTGG GTCTAGTTTT AGATTCATTA TTCTGATTAA TTGGCCTGAC 002800
002801 TTCTTGTTAT TTTAACCATT ATTCTTTTAA TTAGTCTATT AATTTTTGAG GCTTTCTACA TGTATCCTTA TCTGATGTAA 002880
002881 CTTCCACTCC CTCCAATTTT TTTTTTTTTT GAGACTCCAT CTTGGGGGGA AAAAAGTATA TATATATACA CACACACAGA 002960
002961 CACACACACA CACACATATA TCTCTAAATG TGTGTATAGA ACCTTTTATC AGTATAACAT TGATTTATAA TTAAATGTGG 003040
003041 GTGAGGAAGA ATGTGTGGAG TGTTTCAGAA ATTTTGATCT TAAAAGCCTT TTCAGAAACT CAAAGCTTTC AGAAATTAAT 003120
003121 AGTTATATTA ATAGCCTTCT AAACAGCATT AAGTTTTCAA TTTTAATATA TCTATATAAA ATATAGTGTC AAAGAAAGTA 003200
003201 ACATCAATAT AGTGGGTCTG TAATGGAAAT CTGTCAATGA ACATGAACTG AGTTCTTCAA CTACAGGTTG AAGGATAATT 003280
003281 AAACTTTTCA TTAGGAGTGT TCAGCTACAT GGATTCATGG AATGGTGGTT CATAGTAAGT GATGGTAATC TTTTTATTCA 003360
003361 TGGGTGTAAA CCCTTTATAA CTTAGTGCTT AAAATATTAA TCTTTTGATT ATATAATGTC CCATGAATTA TAGTTTACCA 003440
003441 ATAGTTCTAA AACATGCTAA CCTGACCTTT TCCTTCTAAT TTGTTTTTAA CTTCATTCGA GATAGTACCT CTCACTCACA 003520
003521 GATATTTATT TGGTTATCAA GTGAAGATAG GTGTGTCTAA AAGTGATCTT CTGAATCCTG TCTCCCTAGA GGTACTAGTA 003600
003601 ACTAGAGTTT ACCCAGAAAA TTTTATGATT GTAACAAAAG GAAGTAGTGA CTTATGAAGG TTTTGTTTCT TGAATTTTAC 003680
003681 TTTTGCTACT TGTCCAATAG TGGCTAGTTT ATGTTTATCA ATATAGTTAT TCACTGTGCC TTAAGTTTAT ACTTTGTTTA 003760
003761 TGCAAACTAT AAAATTTCCC ATAAATGTAA AAAAAAAAAA AAAAAAAAAT TAAAAAAAAA AAAA
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Predicted Small Protein

Name NONHSAT058426_smProtein_1622:1819
Length 66
Molecular weight 7844.2169
Aromaticity 0.261538461538
Instability index 48.8955384615
Isoelectric point 9.30218505859
Runs 12
Runs residual 0.0343269230769
Runs probability 0.0424394983219
Amino acid sequence MCSFIPLIFKICVFSQAAQKTYKKMFIEKFPSYAYSPSIQFSHFPIFSCFYYFLVDTFQN
FKHIK
Secondary structure LLLLLLLEEEEEELLHHHHHHHHHHHHHHLLLLLLLLLLEEEELLEELEEEEEHHHHHHH
HHHLL
PRMN HHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLL
LLLLL
PiMo TTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooo
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