NONHSAT058478
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT058478 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
585 nt |
Genomic location |
chr18-:14078273..14132428 |
Exon number |
5 |
Exons |
14078273..14078297,14080188..14080265,14084876..14085075,14124349..14124475,14132274..14132428 |
Genome context |
|
Sequence |
000001 ACTTCAGCCA GAGCGCGGGG TTAGGGCTTC ATTGCCTTGT GTCCTCTGCT CCGGGAGACT TCGGTGATTC TGCCACTCAC 000080
000081 TCCGTCGCTC TGTGACCTGC TGGCATTGAA TGATTTATAG CTAAGACTCC AGGACACCCC TGAAGCCGAG AAATGGAACT 000160 000161 CTTAACATTC AGGGATGTGG CCATAGAATT CTCTCCAGAA GAGTGGAAAT GCCTAGACCC TGCCCAACAG AATTTATATA 000240 000241 GAGATGTGAT GTTGGAGAAC TACAGAAACC TCGTCTCCCT GGTGGAAAAG CGAGATTGTC TTTGACCATT TGCTATGGAC 000320 000321 ATTGTCAGGG ATGGTGCAGC CTGAATGAGA ATGTCTGCGG TATTTCCCGA AATAAGTATC CCTCAAGGAT GATACTGTGG 000400 000401 ACCTCACTCA GGAAGAATGT GTCCTTCAGG GAAAGCTGCA CAGAGACGTG ATGCTGGAGA AGCAGTCATC TGGTTACTTT 000480 000481 AGcatgaatg agagatcctt tcgcttcacg tctttgccag catttggtgt tgtcagtgtt ctagattttg gccattatag 000560 000561 TACATGACTT CAGGCTCCTA TGTGc |
Predicted Small Protein
Name | NONHSAT058478_smProtein_152:304 |
Length | 51 |
Molecular weight | 6034.8713 |
Aromaticity | 0.1 |
Instability index | 54.466 |
Isoelectric point | 4.49493408203 |
Runs | 10 |
Runs residual | 0.0353216374269 |
Runs probability | 0.0267355590886 |
Amino acid sequence | MELLTFRDVAIEFSPEEWKCLDPAQQNLYRDVMLENYRNLVSLVEKRDCL |
Secondary structure | LEEEEELEEEEELLLHHHLLLLHHHHHHHHHHHHHHHHHHHHHHEELLLL |
PRMN | - |
PiMo | - |