NONHSAT058486
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT058486 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
826 nt |
Genomic location |
chr18-:14122162..14132437 |
Exon number |
4 |
Exons |
14122162..14122602,14123113..14123206,14124349..14124475,14132274..14132437 |
Genome context |
|
Sequence |
000001 CTTTGTCTCA CTTCAGCCAG AGCGCGGGGT TAGGGCTTCA TTGCCTTGTG TCCTCTGCTC CGGGAGACTT CGGTGATTCT 000080
000081 GCCACTCACT CCGTCGCTCT GTGACCTGCT GGCATTGAAT GATTTATAGC TAAGACTCCA GGACACCCCT GAAGCCGAGA 000160 000161 AATGGAACTC TTAACATTCA GGGATGTGGC CATAGAATTC TCTCCAGAAG AGTGGAAATG CCTAGACCCT GCCCAACAGA 000240 000241 ATTTATATAG AGATGTGATG TTGGAGAACT ACAGAAACCT CGTCTCCCTG GTGTTGCTAT CTCTAACCAG ACCTGGTCAC 000320 000321 CTGTCTGGAG CAAAGAAAAG AGCCTTACAA TTTGAAGATA GATGAGACAG TAGCCAAACC CCCAATGATC TCCCTTCAAG 000400 000401 TTTACAGTGA GACCCAATGT CCCCTTTATC ACTTATAAAG GGCTGCATGA TCTGTCTGCT TTTCCATTGG TTTTGGATAC 000480 000481 ATAGGAATAT TTGTATTTTT GAGGAGTTCT ATGTTAAAGT ATCTTTTTCA GATATTCTTT TTGCATCATG TCTAAAATGT 000560 000561 GTAAGGTGAG TAGGGGACAT ACTGGGATTT GGTTCAGAAA TCCCAGCAAC ACCAGGGACA GATGTTGCAT CTTTTCCGCT 000640 000641 TAATAATTTT TAATCCTGTA GAGGTTGCAA ATGTGATTCT ACAAAAATCC TTACTCAGCA ATTTTATCAG AACAATAAGC 000720 000721 ATTTTTCTAA ATATGAAAAA ATGTAATGTT ATTTTACCTC AAAGTGTTAC TGCTTTAGAA TAAATTGAGA TTTGTAATTT 000800 000801 AAACTCTATA TGTGCAGATT TTCAAA |
Predicted Small Protein
Name | NONHSAT058486_smProtein_161:364 |
Length | 68 |
Molecular weight | 7865.9769 |
Aromaticity | 0.089552238806 |
Instability index | 47.4059701493 |
Isoelectric point | 5.71405029297 |
Runs | 11 |
Runs residual | 0.0208642650621 |
Runs probability | 0.0438566909156 |
Amino acid sequence | MELLTFRDVAIEFSPEEWKCLDPAQQNLYRDVMLENYRNLVSLVLLSLTRPGHLSGAKKR ALQFEDR |
Secondary structure | LEEEEELEEEEELLLHHHLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLHHHHH HHHHLLL |
PRMN | - |
PiMo | - |