NONHSAT058976

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT058976

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2743 nt

Genomic location

chr18-:34357586..34361938

Exon number

2

Exons

34357586..34360151,34361762..34361938

Genome context

Sequence
000001 TTAGAAGCAT ATGGAAAATG ACTATTAATA CCCTATGTAT TCTTTTCAAT AAGGTGATTA AACACAACCG TCTATAATGT 000080
000081 ACAGACCCAA CTCTCGCAAG TTCCAGGCTC TCCTGGGGTG TTCACATCCA TCATGTACTA TTTGACAAAT GTCTGCTTCA 000160
000161 ACAAGCTCCC TGTCTCCCCC AAAGGATCTG AAGGCCGTTC CAAGCGAGGG TGCTTCTGAG GACACTGAGA AGAGTTTTGC 000240
000241 CATTCTGAAG AGGCGAGCCT GTGGAACTGT TTAAGGTCCT GTTCCCAGAA GAATAAAAGT TTCTCATTAT GGCATTAAAC 000320
000321 TCTATTTATT TAGTATTTGA AACATGGTGT ACATGTATGT ATTTGTATAA ACATTTGTTA CATCTAAAAT CCACAACAGG 000400
000401 TAAACAATCT GTGCTTTCTT TTGTGTACAA GTTTGGGGTT TACATCTGGA TATTTTGGTG TTGTGGAGAC TCAGTCTGTG 000480
000481 AAGCTAATCA GATTGCCTCA TATTACCATA ATAACTGTGA CAGAAGTGAT TTGCTCCTTA AAGGGGCTGT TCCTTGCCCA 000560
000561 GAAAAGGTGT CACACTTTTG AACTAATAAA CCGGGTGTCA CGGAATCAAG AGAAACACAG CTGACACGAT GGAGAAGGTA 000640
000641 TGTGCAGGGG ACTCCTGGAG ATCCAAGTCA ATGCGTAGCA GGCAACACAA GCCATGGGGT GACGCTGGGA ATTGAGCTCT 000720
000721 CCCTTTTCAA ACTGTTGGAT GTGAATATCA AGTCTCCCCA ACCCCACCTG GAGGGGTTTC ATCCAGCAAG AGCTTGCCTT 000800
000801 CTGCTCAGCA CACTCCTGGG AGTAACCTAT GAGTGTCACA GCTGCAACTC CGAGGTGCCA ACCAAGCCCA GGGCTCTGGC 000880
000881 TTCTTCTGGG GTCAGGCCGC TCTTCAGGGT TCTTCGCACT GCAGTGGTGG TGCAGGTCAC ACCCAAAGGG ATGAGAAGAA 000960
000961 AAGGAAGTAT GAGCAGCAAG GCACAGGGCA GTCAAGACTC CAGTCCCCCC TTCTCCCCAG GGACTTCCAG AGAAGCCAGA 001040
001041 GGGTTCACAC TCTGTACCTT CCTGCTCTTG CTGAAGTGCC CTGCAGTCTG TCTGCCAGGA CAAAAGTTTG GGGCTACACA 001120
001121 GGCTGGCCTA ACAATGCCAC AGGTGCTGAT TTGGAGGGCC GAGAGGAGTG ATGCGGGCAC TTATAAAGAG GAGAGAAAGG 001200
001201 AGGAGAGGCT CACCCTCACG AGGCTTCTGA GAAGGGGGTG AACTGCAGAA GTGCAGAGGG CAGGAGAGAC CTCAGCATCT 001280
001281 ACCCAGTATG AGGAGTGTAT CAGAGCTGGG AAGGTGATTC CAGAGCAGGG GAAAATGCAA GCTCCACTAA TACAAATGAG 001360
001361 GTGAGGCAAC CAGTGCACAG CGAGGGGTTC CACAAGACCC AACAACCTCA CAAATCCAAC AGACGACCAA CAATAGCTGG 001440
001441 GGACATGCTC AAGACCCACA GAGCAAGTGC ATGAAGCCAG GGCAAGGGGC AGCAGTGAGG ACAAATCTCT CCATGAGTAC 001520
001521 TGTGGGTCTT AGCCTCAACT CACTAAAAGG CCTCTAGAGA CAATAATTAA AATAACCAGT GGCTCCTCGA GGAATGGAGG 001600
001601 CTAAGGAGCA AACTGCCAAA CTTATTCTGG CTGGAATTGG TGGCTGTTTT CTATGGAACA CACAAGACTC AAGAATGGCC 001680
001681 AATGACCACT CTCACTGGGG GGTTGCAGTT GGCAACTGGA GGGATGCTCA TATTTAACTG ACTTAGAATT GGCTTGTGTT 001760
001761 TAGCTTGGCA TGATGGTATT CCCATTGTTT AGTATTTCAA TTTCAACATC AAAATAAAGG CTGGATAAGG GTGAATGAGG 001840
001841 AGGTAGCTGC CTCACCCAAG ACAAGTCTTC ATTTGAAAGG GTGGCTAATT ACATTTTCCT TAATTTACAA ATTGTATTTG 001920
001921 ACCCACTGTG TATTTCTTTA AAGTTCGCAC AGAGTTTGGG GTATTCATTT TCAGAAGAGA AACGTTATGG ATCTGCCTTC 002000
002001 ACCCTAAATC CCTAAATCAG CCAGAGTTCC TGAGATGACC AGGGCAGGCT GTTGATCAAA GTTCAGAGAA AGTAAGCTCA 002080
002081 CCTTAATGTC TCCCCAGTTC CTTTGCCAAC TCCCCTCATC TACTCCCCAG AGGCCAGGGC CCACCTCATG CATCTGCAGG 002160
002161 CCACACCCCA TGGTCTATGC CTTCCCATCA TCCCCTAAAT ATAAGCTCAC TCAGCCTGTG GACAAAAGAT CTGAAAGACC 002240
002241 TATGTCCATG GCAGAATCAA TGGGGACTAA TACCTATTAT GAAAATAAAG GGCTCCTTCT CTTCCAGGAA TCAGCACTTG 002320
002321 GAACAGGGGT CAACATAATA TCCATCAATT GGtcaaccaa caaatgattt attgagaacc cattgtgtgc tcagcattTA 002400
002401 ACTCAAAGAA TCAAAACACA GACATCAAGT ATGGGTTTTT AGAGAGACAT GGGATATGTG GTGAGGGGTT CTCTCAAATC 002480
002481 GTGTTACTGC AACTACTGTA TTTCCAAGCC TACCTTTGGG CCCTGAAGCA ATCTATCTGT AGCTGTTCTT GCACTAGCTC 002560
002561 CTCTTTCCCC CACCCCTGAT CCCTTGGCCT CCAGACTGAA TGTTTGGCTC AACAAGACAA AATGTTTGGC TCCTAAGTCT 002640
002641 CAGCTGGAGA CAGATTACAT TCAACTGAGC AACAGAATTT GTTCTATGGG GCAGCAATAA AAATACTAGT TTGTAATAAC 002720
002721 CTTTTATGTT CTTTAAAGAC TCC
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Predicted Small Protein

Name NONHSAT058976_smProtein_950:1240
Length 97
Molecular weight 10647.2275
Aromaticity 0.0625
Instability index 75.728125
Isoelectric point 10.3616333008
Runs 9
Runs residual 0.040485395189
Runs probability 0.0391960588039
Amino acid sequence MRRKGSMSSKAQGSQDSSPPFSPGTSREARGFTLCTFLLLLKCPAVCLPGQKFGATQAGL
TMPQVLIWRAERSDAGTYKEERKEERLTLTRLLRRG
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLLEEELLLLLLLLLLLL
LLLEEEEEEEEELLLLLLHHHHHHHHHHHHHHHHLL
PRMN -
PiMo -