NONHSAT058978
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT058978 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
790 nt |
Genomic location |
chr18-:34398476..34408974 |
Exon number |
2 |
Exons |
34398476..34398936,34408646..34408974 |
Genome context |
|
Sequence |
000001 AGGGTGGGGG CGAAGGGGAA GCTACGTCCC GGAGGTGCGG TGTGGGGCAC CGGGCGGGGC CGCGGGAACC GGCGCCCCAC 000080
000081 GGAGCTGCTG CTGTCAGACC AACCCCGGGC CCCCATCATC ACTGCGCCGC GCTTTCAGGC GCCGAGAACT ACCGTTCCCG 000160 000161 GCATGCCATG AAATTGGCCT CGGCGCTGAG GCGGGGTCCG GCCCTCCACC CGCTCCCGCC GCGCGCGAAT CGCGGTCGCG 000240 000241 AGCCATGGAG GAGGAGGCAT CGTCCCCGGG GCTGGGCTGC AGCAAGCCGC ACCTGGAGAA GCTGACCCTG GGCATCACGC 000320 000321 GCATCCTAGA ATCTTCCCCA GGTGTGACTG AGGTGACCAT CATAGAAAAG CCTCCTGCTG AACGTCATAT GATTTCTTCC 000400 000401 TGGGAACAAG TAAGTGTTGC CACATGAACT CTACCTCCCA TCAAAGAGAG GTCAGTGTAA ATGTCCCTGA GAAGGAAAGA 000480 000481 TTAGGGGAGG AAGAATATTT ACTCAGACCA CAGCTGCTTT CAAGGTAGAG TTTACCTTTT CTATGTTCCT GTTCAGCCCA 000560 000561 CTTAACAGTT CCTTTCATTC TATGCCACTT ACCCAGCATG GAGTGTTTCC CCTGAGCCCC ACTCTCCTAC AGAAGCAGTG 000640 000641 GACATTCAAA GTTGTGTACA ACAAAGCTAA AAATCAATTA AGGAAAAGAA AGGATATGTG TTAATAAGTG TCATGCTGTC 000720 000721 CAGAACATGA TTAAGTGTTG CACATAACTA CTAAGCAGAT TAAAAGCTAA TGCTTTCCAA CTTTCCTCTG |
Predicted Small Protein
Name | NONHSAT058978_smProtein_542:703 |
Length | 54 |
Molecular weight | 6270.3785 |
Aromaticity | 0.132075471698 |
Instability index | 55.6452830189 |
Isoelectric point | 10.3950805664 |
Runs | 8 |
Runs residual | 0.00931891394386 |
Runs probability | 0.027733615969 |
Amino acid sequence | MFLFSPLNSSFHSMPLTQHGVFPLSPTLLQKQWTFKVVYNKAKNQLRKRKDMC |
Secondary structure | LEEELLLLLLLLLLLLLLLLLLLLLHHHHHLLEEEEEEHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |