NONHSAT059022

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT059022

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

6264 nt

Genomic location

chr18+:37086726..37373060

Exon number

19

Exons

37086726..37086998,37092162..37092221,37092241..37092408,37096156..37096591,37115422..37115581,37157497..37157576,37192161..37192510,37202657..37202756,37236410..37236625,37236839..37237455,37243283..37243787,37244597..37245453,37258562..37259489,37260063..37260606,37261829..37262456,37262474..37262553,37278354..37278493,37331293..37331325,37372970..37373060

Genome context

Sequence
000001 AATAGGAAGT ATGGTTTATT CCCCCATGCT AATCTGGCTA GATTACCCTC TGGACTATTG GTCACATCCT GACCATACCG 000080
000081 TGTTAGTTTT TACAAAAAAT AGCATTTACA GCTCAACCTG CATTACAAGG AAAAAATGAC TATCAAGACT TCACAATAGT 000160
000161 GGTCTTCAAA ACATTACAAA TTTCCAAATG TCAAAAATCG TGAGACATCT CCAAACCACA TCAACAGTTA ACAGAAAGTC 000240
000241 ATATTTGTCC CTTGAAACTG CCTCTACAAA ATTACCCATG TGAGAAGAAA CAAAGTGACT TCCATTCCTG CTTAGGTATC 000320
000321 TGAGGCTGAT TTCACTTTGA TCTTAGATGA GAAGAAGCAG GTAAAGCTGT TAAGAATCTG AAAGAAAACT GACTCAGTTG 000400
000401 GCCAGAAGGA CTCAGAAGTA GGAGTCTGGA CAACAGTCTC CCGAGAGTGA AGAAACTGCA CTGTTGCTGA GAAGCAGCTT 000480
000481 CCCTGGTGCC TAGGAATGAA GAGACAGTGT CTTGTTCTGT CACCCAGGCT GGAGTGCAGT GGTGTGATCT CAGCTCACTG 000560
000561 CAACCTCTGC CTTCCGGGTT CAAGCAATTC TCCTGCCTCA GCCTCCAGAG TACCTGGGAT TACAGGTGCC CACCACGACA 000640
000641 CCCTACTAAT TTTTTGTATT TTTAATAGAG ACAGGGTTTC ACCATATTGG CCAGGCTGAT TTCGAACTCT TGATCTCAAG 000720
000721 TGATTCACCT GCTTTGGCCT CCCAAAGTGC TAGGGTTACA GACATGGGCC ACCACACCTA ATCAGTAGAT AGATAGGAAT 000800
000801 TTAAATGCTA ACTTTCTCCT ACTACTTTCA ATAAATGGAT ATATGGCTTT CAATATTCTA ATCACAAACA CCTAGCTGCC 000880
000881 AAATAAAGCC AGGTGTCCAG TCAATGCAGA TTAATCTGTG TGTTATATAC AGATGTGATG CCCAGAGGAA AAATAGTGAG 000960
000961 CCAATATTCT TCTTTGCAAC TGGCATAAAT CTTAATTCAT TCTACACATG TGATGAATAC AACTTGCATT GCCTCTTCTG 001040
001041 TAAAGGTGCT TTCATTCCAG TAGTACAGGT GGTTTCAACC ACATACATAA GGCTCCTTCC AATGAGTTTC TTAAGAACTT 001120
001121 GATTTTATTA CAGGGCAAGT AATTATCACA AACATTTAAC AGTAATTTAA ATGATTTAGA GGCAGACACA GATAGACAGA 001200
001201 GAGAGAGAAA ATGAATTAGT GATGTGCTGG CGTCCACTGA CATCTAACCA TGTAAGTCAA ATTAGCCATG ATAGGAGTAT 001280
001281 AGTTACACCA TGAAAATCAC AACACCACAC ACACACGTGC ACACACACAC ATAAATCAGG TTTATTTGTT TTTCAGAGAG 001360
001361 TTTGTTGCTA AACATTTACC AGCACACCCT AAAGAGAGGA GAAAAAAATA TGTGAAGAAA AAGAAAAAAG GAGAAATCAA 001440
001441 AGAAAGAGAA AGCAAAAAGA GCATATTTGG ATGTGGAAGA AGAAAAAGAC AAGTTGAACT GTCTTAAATT CCAGCCCATG 001520
001521 AAAGCCTTTT TTTTCTTTCC TTCCGTGTAG TTTCCAGACT AGCTGATAAA CTTCCTAAAA TATTACCCCA AGTTTTACAA 001600
001601 TGTGACTCTC ACCTATTTTC TTCATGTCTT AGGCCAGAGT CTTTCAAGAA AAAAAGTCTT ATTAGAGAAG TCTTCATATC 001680
001681 TCGTGAGGAT GAATTAAAAG CAGAATCTCA ACTTTGCTAC CTTTAAATGT CACGGAGAGA AAAAACTGCA AAACCATGTG 001760
001761 CAACAATATC CATGATAAAT CATCTTTGAT CTCAACATAA CGGAGACTAT AAGGAGTATA AAGACTAGAA GAAAGAGTAG 001840
001841 AAGCCAGAAA TTTTACAGAT TTTTTTCTGA TTTTAATTTA TGTGTGTATA AATATCTTGG TGATATTATG ACATGCCACA 001920
001921 TTGTTGCAAA CGAACTACTC TTTTAGTGCA TCAGTGTTCA GAGTAGTGAT TGTATTAGCC TACAGTAGCC AAGAGTGCAG 002000
002001 AGCAGTAATT TTCCCTACAT CATGATGTCA AACTTTTAAA TCCAACCGTT CAAATTAGCA ATAAGTAAAC TGCCATACTT 002080
002081 ACTCATTTTT TCAAAAAAAA TCAGATTTGA TCTCATACCT AAGAAATTAA ATTTGTAATA TTGGCAATCA GAGCTAGCCA 002160
002161 TATGTTTGTT ATTTAGCCAC CATGTGTATT TGGCAAGTTT CTACCCAGTG TATATTTCAA ATATCTTTTT CCAGTCTGTT 002240
002241 AGTTTACTTT AAGGATTTTG TTTATGACAT CTTTTGGGTA AACTTCAGCA CTTTGATGAT CCTCTTTTAT TGTCTTCTGT 002320
002321 AGCTCTACAG CTATGGAGAC TGGCTGTCAG TCTAATTTTA ATTTTAATTT TAATTTTAAT TCTATTATAG GTGATCCACA 002400
002401 ATCAATTCAG AACCTGGTCT TCTATGGTGG CTCACAGTTC CTGCACCCTA CAATATCGTG AATTTTCTTC CTCTTCATCT 002480
002481 AATGACATGA ATATGCTCCA GTGGATCCTA GGATATCTTT CACATGAGGT TACCCTTGCC CTTTGGATGT CAGGTGGAAC 002560
002561 AAAGGGATGG AAGATTTTTT GTACTGGGAC ATTCAGTAAA CCCCTAGGCC TACCTATTGT CTAGTCAGAG TTAGAGAAGC 002640
002641 AAATGATGTC TGTGAGGGCC TACAAGGCAC AAGAGGATGA AAGTTTAACT TAAAGTTTAG ATGCTGATAT TCTAGCTAGT 002720
002721 AATAATGTAT GATTGCCTCA TGTACTACTC TTTTTTTATA TTTCTCTCCT AATGTATAAA GATGGATTTC AAAAGATAGG 002800
002801 CAGCCTGGGA TTCAAATTCT GATCATCTTT TCACTTTGTA AACTAATGGA TATATTTTTT TAAAACATTG TGTTTAATAC 002880
002881 ACGCCAATGC CAAAGGCTTT CTACAGACTC ATGTGGAGTG GGATGATGCC CAGAATGTCG ATAAATTGAC AGAATAATAT 002960
002961 GAAGAGAATG ATTCTGTCCA AAGAGGTTAA TCATTAAAAT GCTCAGAGGA GACCTCAGCA GGCCCTTGAA GAACACAGCA 003040
003041 ATTTAAGAAG TAAAAAGGAG GATGTAGGGG AATGTTAGTC AGGGTCAAGC CAAACATTGA ATTCAGCATG GCAAATGAAA 003120
003121 TTTACTGTAA GTGGTCTCTG TGCTGAGATA CATATTACTG TTTGTGCAAA TTTAGTTCCG TTAACTTTTC CCAAAACTTC 003200
003201 TTCACCACCT TATCTTGGAG CTTAATTCTA ACTCTCTCTA CTATGTCCAT ACTATGGGAA TGTCTTCAAG ATAATATTGT 003280
003281 CTTGTTAAAA TTCGGCTTCA GACTTCAGGA CTTTTACATT CTTGGATGGG GATCTAAACA AGACATGAAC CAATCATAAG 003360
003361 GAAATATGGC TCCTTCTCCA TTATTTTAAA CAAGAAAATA TTATTGTTAT TGTAGCTGTT TGAGAGACAA GGAGATTAAA 003440
003441 CTTGCTACGG TTAAGAAATT TGAAAGCAGA TTTTTTTAGA GGCAGACAAT AAGGAAGAGT GTTTTTGGAC ATACTTTGCT 003520
003521 CAAACCTTTC CTGTGTTTGA GTATTCCACC CAAACAGAAC TTTCTCCATT GAGCCATTTG CTGTCCTGTC AGCTAAAAAA 003600
003601 TAAAAAATAA AAAAAACAAT AAAACAAAAC AAAACAAAGA GCAAAAACCA TTTTATCTTC TTGATACTGT GGCACTTGAT 003680
003681 GTGCAACAGA GAGACTACAT TCTTGCAATC GGTCAGAAGC AGAACTTGAC CAATATGAAA CAATACATAT CCTAAGAAAA 003760
003761 CAACATGCAC AGATAATTTG CAGAAAGTTT AGAACAACAA CAATAAAATA TTTTAATTTG CTTTTTTTGA GATGGTGTCT 003840
003841 TACACTGTTG CCCAGGCTGG AGTGCAGTGG CGCAGTCTTG GCTCACTACA ACCTCTGCCT CCCGGGTACA AGCGATTCTC 003920
003921 CTGCCTCAGC CTCCTGAGTA GCTGGGATTA CAGGTACCCA CCACCACACC GGCTAATTTT TGTATTTTTA GTAGAGATGG 004000
004001 GGTTTCACGA TGTTGGTCAG GTCGGTCTTG AACTCCTGAC CTCGTGATCC ACCCGCCTCA GCCTCCCAAA GTGCTGGGAT 004080
004081 TACAGGCCTG AGCCACTGTG CCCAGCCTTC TGTATTATTT TCAGTATATG TGCTGCTGAA GTGAGCACTA ACCTTTTTAA 004160
004161 TGCCTTCATT ATATTTTCAA ATACTTCTAG GAATTAGTAT TACAGGCAAG ATTAATCAGT GTTAACTACT GATATTAGAA 004240
004241 TAATGATTCA ATTTAAATCT TTCAAATAGT AATTTGTCAA ATAAATATTC AGGATATCTT GTAATAGCTA AGTTTACAAA 004320
004321 GAAAAGTAAG ACATAGTCCT TGCTCTTGAG AAACTTATGA TGTATTAAGA AAAACTAGAA GCCAATATGG TAAACGATAA 004400
004401 TGAATGTGCA TAAACCAGTG TGGGGATATA AGGCAGTTAC AAAGATCTTC ACAAGGCTCA GGCTGGGCTT CAGATTCTTG 004480
004481 AGGACATTTG AGCCTTGAAG AGGTCTTTCA GTCACTCAAC ATGTATTCCT TAGGTGCCAA TTATGTTCAG ATGCTCAGTA 004560
004561 AATGGAATTG CATTTTGTAA GGAGGGAGAC TCAAGGTCAA AGCAGGAAGA TTGTATCCAA TCTGGAGCCA GCAAATTGAC 004640
004641 AGGGAGAGAG AAGGGAATTA ATAATTACTT CGCACCTATT GTCTACTGGG TGCTTAATCT CTCAGCAGGC CTAGTTCAAG 004720
004721 ATTTTTGTTC CCACATTACA GACGACAAAC TCTAAATGCA AGGAATTCAT AGCACTGCCT TTTGTCCTGT GTGGACTCTG 004800
004801 TCTTGCTTCT TCTCCTGTAT TTTTATGTTG CTTTTTTTTT GGACATTGTG ACAGCATTCT AAGTCCTAAA GCCCACCCAT 004880
004881 GTCCACCCAT CACCTCCTTT TATAATGCTT ATTGGTTTGG GTTTCAAGAT ATCTTTCATG AGCCATACTC ACATTACCTT 004960
004961 CATGATATTA ATGAAATTTC CTACAATTGC ATGTAGATCA CTGTTTCTTA TTATTTTGCA TGAAGTTTAG CTGACACGAA 005040
005041 CCTGCTTTAC AAATGTACAT TTACTCCCAA ATTCACTTGC TTTGCAATGC TTTAGATGGG TTTACCTAAA AACCTTGGCT 005120
005121 ACAATTGAGA GCACCTGCCA GTTCCACAGG AGCAATAATC AGAAGTGGTT TCTGACACTG AGCAATGCTA TGGTCACACA 005200
005201 GGGACTACCT GGAACATTGA GACAATTACC TTAAGATCAA GGCCCCTAAA CCAAAAGAAG AGAAAAAAAA GTTTTTTTGT 005280
005281 TTTTCAATTG CTGGGGTGGC CATATCTTTA TTAAGCATTT ACTTCAAGGG AGGAGATCGA TGAAAAAGGC TAGGACTCTA 005360
005361 ACATAATCAG AATTTCACAA AATTGTTGGG GATGTTAAGG CTCAAAATAA CAACCTGTAT TTTACTATAG AAAAATTTAA 005440
005441 CTGTTTCTTT TAATGTCTCT TAGCATCATG AGGACCCAAA ATTATCTTAT ATCCTTTATG TGACTCAATA TGCCTGCTAG 005520
005521 CAAATTGCTG ATCACCAGGG TGGTGCTTAC TTCTTAGCTT TTAAATTATA TGGTAATATT AAAAATAAGT CTTAAAGGAT 005600
005601 CCTAATTCTT TAATAGTAGC CATCTTTATT CCACAAGCCT CACTGTGAAT TATTTATCGA AATTCATTAA GTGAATCACT 005680
005681 TGCTCACGAA TGTAGCAAAT ATTTGTTAAG CTGTCTCACT GTGTGCCAAG TGGTCACTTT TTGGACATAG AGATTAGAAG 005760
005761 CATTTGGTTC CTACCCTCAA TGAGTTCACT TTAGAATCAA TGAAAGAAGG AACAAAATGA CCTTTGTGAC AAAATCACAA 005840
005841 TACAAAGGAG TAAGTGCCAC AGTATCTGCA CTTATCCAAT ATGAACAAGG CTTCTCAACC TCAGCCTGGG GATTGAGATT 005920
005921 AAGGAGCTGC TGGCATTGAC CTTTGGGAAA TGAGTGATGA TTAGGCAAGT GGCCATGGTT GGGAAGGTAT ACCAAATGGG 006000
006001 AGTTTTATAT GGCATAAGAC ATATATCAAT AATATTTGTG GATGCATTTA ACTAGAGTCC AAATCCAGTG GCCGATTAAC 006080
006081 TCCAACCGTT TTTTTGATTT CTCAGGGTAG TAACCAGCTG AGCTGTTAAG CCAGTCAAGG CAGCAGAACA GTTGCAACAG 006160
006161 CTCAACGGTG CCCCTTTTAA AAATATTTTA GGGATATATT TAAACCTTGT TAGTCATTTA AATATAAGAA GAAGTTCAAT 006240
006241 ATTATTGTTG TTGTAATTAA GTGG
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Predicted Small Protein

Name NONHSAT059022_smProtein_2423:2623
Length 67
Molecular weight 7345.4559
Aromaticity 0.121212121212
Instability index 57.9909090909
Isoelectric point 7.82623291016
Runs 11
Runs residual 0.0160587915079
Runs probability 0.0491882256587
Amino acid sequence MVAHSSCTLQYREFSSSSSNDMNMLQWILGYLSHEVTLALWMSGGTKGWKIFCTGTFSKP
LGLPIV
Secondary structure LEEELEEEEEEEEELLLLHHHHHHHHHHHHHHLHHHHHHHHHLLLLLLEEEEEELLLLLL
LLLLLL
PRMN -
PiMo -