NONHSAT059033
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT059033 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
6426 nt |
Genomic location |
chr18+:37302948..37309373 |
Exon number |
1 |
Exons |
37302948..37309373 |
Genome context |
|
Sequence |
000001 TGAGTGCTTT TCTCTGGTCT CCTTGATCCT GCATCAGGCG AGGCTCTGCA AGTATGACCT GTACTAAGAT Cagggtgacc 000080
000081 atttgtgttt ggtggtccag gataatcctt atttgtgcct tttattctgg cataattatt agtggtgcat ccttcatgtt 000160 000161 tctcaaaagt gtcttggttt agagagcaga ttatatgtca cccAAACTCT CCTTTCGATC CTTTAATCTC CCTTAATCAT 000240 000241 CTCTTGAATC TGCCTCTTCC TGTCTATTCT CACACACTCT GTTCTAACCT AGAACCACTT TATGTCTTAT ACCAGTTTAA 000320 000321 TAATTTCCCA ATACCTCACC ACGGATCCTC TCCTTGCAAT GAGTTCTCAC CATTGCCTTT AAAATAAACT TTATATTCTT 000400 000401 AGTACAGTAA AGTAGGTCCT TTAATGATTT GTTCCCTGCC CAATTTTCAG ACCTTACCAA GGCCCTTCCA TAGTCCCATG 000480 000481 GATTCCTCAT TTATTCTTTT GCCTTCAGGC ATGCTATGCT CTCTGTTCAC TCTCCTTCAA TCCTTACTTA GCAACCCCAT 000560 000561 ACCCCCTAAA GCACTAAACA CAAATATCAC ATCCTTAATA AAGTACTCTC TGATCTCCTA GGGTACATCC ATTGTGGGAT 000640 000641 AATTTTCTTA CACATGCTTT TCTTATGGTT GTGGTCATAT TGCTTTGTAT TTGTTTGGTT GGTTGTTTTC ATTTTTTTCT 000720 000721 GTATGCCTGT TTTGACAATC TATATTGAGG AGTATAACTT TTTTATAATA TTTCCATTTC CCCAACGTCT GTCCCAGGGT 000800 000801 CACCACTTAA TAAACACATC CCTGAATATC GAAGATAAAT TAAAAATATT AATCTAACAT GCTGAAATAT ACAGAGCTAA 000880 000881 CCATTCTGCT TTTCCTGGAA CCTTCTGACT CTGTCAGTGG GTGAAGTCCC CAACATATTG CAgtgacctt gagtaaataa 000960 000961 cttgccctgg gaccaagttt caataattat aaaatggaaa tTTTGTCATT GCCTATGTTA CGCCAAAACG CATTGAAGGT 001040 001041 ATATTTATTA AAAACTGTTT TGGAGATGAT AAGTAATATA GATTTGataa ttattataaa tattataaGG AATATAACCA 001120 001121 TTATCGCTAA TTCCTCTAAG ATCCCAAATA AAACAAGAAT AATAAGATAA AGATATACCT GTTCACACAC ATGCATAAAT 001200 001201 ATCCACAAAT AACTCTTCCT CCAGGATACA GGCTGATTAC TGATAATGAG ATGTATCTTC CAGCCAATAT ATTTAAACTC 001280 001281 TTATTCTGAC TGATGGCCTG TCTTAGGATT TGACAAAAAT ATTCTTGTAA AAATAGATTT AACGATATCA ATTCTGATAA 001360 001361 AAGCAGAACC AAGCTTGGCT TTGAGACAAG AAATTCTAAG CCCCAAAGCA GAAACCTATT TAGGAAGTTA AAATCATTAA 001440 001441 TTAGCTTTTC TGGTTTTGTC AGAAGCTTTA TTTCATTGAT GGTTTACTGC ATCTACTTAG AGCCAGTTCT TAACTGAAGA 001520 001521 GTGACATTCC ATAATAACAA TAGGTTTATG GTAATTATTT AAACTTAGTT AAATTTTGCG TATTACTCTT AAAAAAGTGT 001600 001601 GTGTGTGAGA GTTTCAGAAG TAATGAAAAC CTGTTTTGCA AATATAAGAT ACTCCAGGTA ATATTGTAGA CTGCAAAATG 001680 001681 TATAGTGAAA AACTAGCTTC CTAGTGCCCA TTGTGGTTCT GCCATCATTT ATTTATTTAA CTATGATAAA GATATTAACA 001760 001761 ACTAACCCCT TTGATAATCA CTTATGTATG AAGCATAGAT TTTCCCAGGG GATTCTATAA CAAGAATCTG AAAGTTGGCA 001840 001841 AGGGGCAGAG AAAGCAGTGA GTTAGTCATC ATTGTACTTG GAGGAAACAA AAGCTGATGG TTAAGTTATC TGTGTATGTC 001920 001921 TCAGAGAAGA CAGGTAGGTG CATTGTGAAT ACAGACTATG GTGAGGTAGA ATCTCCAGTA TCTGTCTCTA GTTTGGACTT 002000 002001 AAAATATACA GATCATCATA AAATTTCAAA TTAAAACACT TGGTTTAGGT CCTAAGGAAA TTGGCAGGTG GCTGCTAATT 002080 002081 CTCGTAACAA TCATCTTGAG GGCTCATATT TCCTCATCTT CATACTGTGA TGTAAATTTA CTTTCTTGTC TCAGCATTAT 002160 002161 CAGAATGCAT TAATAAGACT AGAGGTAAAA ATTTATGAAC TGAAAGCACA TAAATACACC TTGAACTGAA GAAGAAAATT 002240 002241 TTCATTTATT AACATCTATA GAATGTGATT TCAGAGGCAT TGAGCATATC TCTCCTATGT TTTACTCTCC TGTTTCCTGA 002320 002321 GCCTAAATAT CTTCTCCTTT AAAATATGAA CTCTCCAGGA CAGGCATGCT GATTTGATCT GTTATCAGCC TTAGGAAATT 002400 002401 GAGTGTAAAC AAAGAATTAG AGAGAGGATG GCAAAAGGAA AGAGCTGACT GGAGACAGTA AAATATCACA CAACCACCCA 002480 002481 CAATGGGGAG AAGAAACAAG TGTGAGCTTG AGAAAGGACA TACATTGATG ACTAGAGTGG AAGGACAACT TCAAATATAA 002560 002561 GATATCCTAG GTAATATTGT AGACCGCAAA ATTTACAATG AAAAACCAGT GTTCCAATTC AGAATTTTGA TATAAATGCT 002640 002641 AATAAACCAG TGGATAAATA AACTTCTTGA CCAAAGGCTT TGTTTAAAAT AAATAAATAT CCTCCTTAAA AATTTATCAA 002720 002721 ATTGACAAGC ACAATAAATT ATGAGAATTA CCATTTTGCT TTATATTTGA CCTTAAAAGT AGAAACCATT TCCTGGTTTA 002800 002801 TTCATGTTTG GACAGATGAC ATTTGTGTGG CTGTATTTCC CAAATTATCT CTTTCTTCTT TTCTTCAAAC TAACCATGCA 002880 002881 TCTGGGGACA TTCAAACACA CCACATTTTA GCTATCACGT ATGAATGATC CATTTCTGAA AATCTTGGGT GTGTAGGTGA 002960 002961 AATGAGGTGG GGGTCCAGTA GGTAGACATC TTCAAAATGT GATTCTTGGA GAAATTTCCA GGGCTATATC CATCCCATCA 003040 003041 ATAGGGCATT GAATTAGGGG ACCTGGTCTT TGTTTCCAAT TGACAACAGT AGAGATTAAC TACAAGCCTT CCCAGGTGAT 003120 003121 ACATTACTTT GAGATACTAT CCAAAATTTA AGTTTCTTAA GTCATGTAAC CACATGGTCA TTGACATAGT GTGTATTCAA 003200 003201 TGCTAATAAT GAAACTGCCT GTCATTATAT CCCTTTGCTT ATGAAGAGCT AATTTGTTTT GTGAGCATAA AAAATTTTTG 003280 003281 AGGGATTGGA CATATATTTT AAAGCTAGTT AATTATTAAT CAGTTTTTGC AGAACTCTAT AGAATAGCCA CACTTGGAAT 003360 003361 CATCAAAAGC AATATTGTAA GAAAGAATTT AAATTAAGAG AAAGAAAATC AACCCACATT AACTTGTCAG ATTACGAATT 003440 003441 CCAACAAAAA ACACTGGGAA ACCATGGTCT TGAGCCAACC ACCAACTCTA GAGTAGGTGC AGGGATTCTT TCTGTTCCCC 003520 003521 ATCAATAGTA CCTTGACTAT ATCCTTGGCC ACATGCCCTG CTCCTTCTGT GGCTCTATCA ATTGTGTCTT TGACAACTCC 003600 003601 CTCATTAATG CTCTTTTGAA AAATAATTTA AAGCTCTCTT GAAGATAACA AATACTTCTT GCCCTAAATC CCTCCCCCGA 003680 003681 TCCATCTTTT GTAGCAGGTT AACCTCCTGT GCTCAAAAAC ATGCTTTCCA CTTTCTCTGC TCAGAAGGAG GGAGTTGGAA 003760 003761 GCTGCCCAAT CATACTTAAA AACAAAAATG GCAGGTAAAT TTTATCAGTC TTGTGCAAAA AACCTATAGA AGAGAGTGGG 003840 003841 GCTAATATCC TGCCAGCTGG AGCAAGTCAT TTCACAAATT TAATATAATT TTCTCTACTA AAGTGCTTAC TAAATTGAAA 003920 003921 AAAAATACTT TTATTAGTAA TTGTAATTCT GCAACTGTGT TCAGTAAGTA CTTTTGTACC ATTATCATTC AGAAAAGGTG 004000 004001 AACAGGACCC AATTTATGGC ACAATCTAGC AATCAGTCCA AATTCACACC CAGTTTCCAA GTTATTTCTC ACCTAGGAGT 004080 004081 TGCCTTTATT CTCAGAAATT TTCCACTGTG GTTCTGAAAT TGGTCTGGCT ACTTACTGCA AGATGTGGAC CTGTCTTAAG 004160 004161 CTTATTGTTA ACCGACATAA AATTCTCTTT AGAAATTTAG CAGTGGACTT TCATACATAT TTCATGAAAT TTCATTCCAT 004240 004241 GTTAGGCCCA AACAAATGAG ATCAGTTTCA TTGGCTCAGC TTCCCTTACA GATGACAGTA ACCATTCACT CTTAGAAAAG 004320 004321 AAGACAGAGG CTGACTTTAG GGAAGGCATG TAGAGATATT TGACAAAGAT ACTTGGATAT GCAATGAGAC ATGATTTGAT 004400 004401 ATGATTATTA CACTAAAATA ATATCACATA GGCTATCATT TTATTAGATG GAACACTGAA ACTATTGCCC CGGAAAGGCA 004480 004481 CTGAATATTT ACCCCAACTC TGTATTTACT TCCATCCATA CCCTAACTAG AGAAGGAGCT AGAACTTGGA TTATCTCAGA 004560 004561 AGAAACCCTA AATCAAGAAA GAGGTATCCT GCAGAATATG GGGACTTATA AGTAATTTCC TCTGTCCACA ACAACATGAA 004640 004641 TTCTGTCAAC TTAATTTTTC AGATCCAGAG AATTTCAGTA GCATAAGGAA ATCGCTATAG ATGCTATTGG CAACTCATCT 004720 004721 ATCACCCATG TACTGTACTG AGGTAGTTAG CAGGTCTCCA GTCCACGGCT TTTCCTGAGA GCTTTTGCCG GAGACCTGGC 004800 004801 TGTCTGTTTC TTTGCTGTAA ACTAGTCAGT TTAAAAGTGG TCCTAGGAAT GGGACCTGTT CAGGAAAGAA TGGATTTTAT 004880 004881 GCCCTGCTTA TTGCCTTCCA AATGCCAGGA GCTTTTCAGA GTAATAACAA CTGGTGTAAA AAGAGAATTT GAAATAAAAG 004960 004961 AAGCTTTTAT TGCCCTAGAA AGAGGCTGCC CATAAACTTT CCACCTGCTT TAACCGCTGG GGAATGTGTG GGTATCCACG 005040 005041 ATTTCTGGCC AATGAGAATT TACCTTTCCT ATTAGCCTCA TATCCTCCAG AATAATGTAC ATGATAAAAA ATGGAGCAGG 005120 005121 AAAACAGGAT CAAACCCCTT TAATTGCAGT TGTCAAATGT ATTCCAGCCT AGCACTTTAC ACATTCTGTC ATCAAGAGGA 005200 005201 CATTTTACTG CTGGTGCTGA TGCTTTACTC TTATGCAAAA TCTTTCATCT TGGAATATCA AAGATTTCTA CAAACACTAA 005280 005281 TTCATTAATT AAGCCTCCTG ATGACTGTTC ATAGAAAACA GGAAAATGTA TTTCAAAATG AAAGAGATTA AAATTCAGGT 005360 005361 TGTTTGGGTG GCAGCTTCAG TGAACAAAGA ATGCCATTTC ACCGGTGTCA TTGTGACCCC TCACAAATCA GTCACTGCAT 005440 005441 CCAAAACAGG CCTTTCTATA AAAATGCAAA CATTTTTCAG GTGAATGTTT CACAGGTTTG TCTTTAGTAT CTAATGAACC 005520 005521 TTCTTCGTGG CACTCCGTCA AATCATTTGT CTCTAATTCT GTTGTTCCTT TGTTCTCTTT CTCTAATAGA ATGTGAAACC 005600 005601 TTACGAACTT GCTGAGATTT ATTGGTTCCC TTCAGAGTGG CTGTAGAAAA ACTGGTGTTA AAACCCCACC CATAGGGAGA 005680 005681 GGGAAACCTG CCCTGCATCA AAGACAGGTT TTCAAAAAAG CTGCCCTCAA AAGCAAAGGC AATAAAAATA TTTGGCTATG 005760 005761 TTGGTCTTAA GTAGTTAAAA TGTTGAAACT CAAATCAAAA TAAAACATTA TCACCTCAAA TCACTATATA AATAAAAGAG 005840 005841 ACCGGAGAAT GTTTTCTACT CTTCTATCAT TCAATAAGTA TAATTTAAGT AGAGTCCTGG CCAATCCAGT GCCAGTGTGT 005920 005921 GGCTGTTTCT CAGGAGGTTT TAAAGTCCAG CTTGGGTTAA TGCATGCTCT TGCCTAGTTT GAAAGAAAGG TCGATGAGGC 006000 006001 ACAGGAAAAG GTACGAGAAA TGTGTGCTGA AAATTCTACC GCCTCCCTTC CTAACTGGAA TACCACATGG GATTCTAAAT 006080 006081 CCTACAATTT CTGAATCCAT TCAAATGCAT TTGAGGTTTG CCAGTATCAT AACCAGTAAT GTAAGGAAGA ATTTCATTAC 006160 006161 CTGGTCATAA ATATTCCCAT GAAGTAGTCT GTAAACCCAT GCTTAGAGAG CCCCCATGAC TAAAACACTC AACTAACATC 006240 006241 TAGTGCCTAT AAGGTACAAG GACTGTGTTG GTATCACCTT TGACTCCTCA GGGTTTCTAG AAATTAGAAC CCGGGTCTAA 006320 006321 AAATACACAC TTAAAATTCA ATTATTTTTA CTAATAATAA ACTAATTTTC TAACTTTCTC TCTCTCCCTT AGCACTGTCC 006400 006401 CAataatgta gcagagtgaa taaaag |
Predicted Small Protein
Name | NONHSAT059033_smProtein_5963:6169 |
Length | 69 |
Molecular weight | 7943.4353 |
Aromaticity | 0.0735294117647 |
Instability index | 44.8014705882 |
Isoelectric point | 11.0043334961 |
Runs | 7 |
Runs residual | 0.037559618442 |
Runs probability | 0.0178792237616 |
Amino acid sequence | MLLPSLKERSMRHRKRYEKCVLKILPPPFLTGIPHGILNPTISESIQMHLRFASIITSNV RKNFITWS |
Secondary structure | LLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHH HHHLEELL |
PRMN | - |
PiMo | - |