NONHSAT059033

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT059033

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

6426 nt

Genomic location

chr18+:37302948..37309373

Exon number

1

Exons

37302948..37309373

Genome context

Sequence
000001 TGAGTGCTTT TCTCTGGTCT CCTTGATCCT GCATCAGGCG AGGCTCTGCA AGTATGACCT GTACTAAGAT Cagggtgacc 000080
000081 atttgtgttt ggtggtccag gataatcctt atttgtgcct tttattctgg cataattatt agtggtgcat ccttcatgtt 000160
000161 tctcaaaagt gtcttggttt agagagcaga ttatatgtca cccAAACTCT CCTTTCGATC CTTTAATCTC CCTTAATCAT 000240
000241 CTCTTGAATC TGCCTCTTCC TGTCTATTCT CACACACTCT GTTCTAACCT AGAACCACTT TATGTCTTAT ACCAGTTTAA 000320
000321 TAATTTCCCA ATACCTCACC ACGGATCCTC TCCTTGCAAT GAGTTCTCAC CATTGCCTTT AAAATAAACT TTATATTCTT 000400
000401 AGTACAGTAA AGTAGGTCCT TTAATGATTT GTTCCCTGCC CAATTTTCAG ACCTTACCAA GGCCCTTCCA TAGTCCCATG 000480
000481 GATTCCTCAT TTATTCTTTT GCCTTCAGGC ATGCTATGCT CTCTGTTCAC TCTCCTTCAA TCCTTACTTA GCAACCCCAT 000560
000561 ACCCCCTAAA GCACTAAACA CAAATATCAC ATCCTTAATA AAGTACTCTC TGATCTCCTA GGGTACATCC ATTGTGGGAT 000640
000641 AATTTTCTTA CACATGCTTT TCTTATGGTT GTGGTCATAT TGCTTTGTAT TTGTTTGGTT GGTTGTTTTC ATTTTTTTCT 000720
000721 GTATGCCTGT TTTGACAATC TATATTGAGG AGTATAACTT TTTTATAATA TTTCCATTTC CCCAACGTCT GTCCCAGGGT 000800
000801 CACCACTTAA TAAACACATC CCTGAATATC GAAGATAAAT TAAAAATATT AATCTAACAT GCTGAAATAT ACAGAGCTAA 000880
000881 CCATTCTGCT TTTCCTGGAA CCTTCTGACT CTGTCAGTGG GTGAAGTCCC CAACATATTG CAgtgacctt gagtaaataa 000960
000961 cttgccctgg gaccaagttt caataattat aaaatggaaa tTTTGTCATT GCCTATGTTA CGCCAAAACG CATTGAAGGT 001040
001041 ATATTTATTA AAAACTGTTT TGGAGATGAT AAGTAATATA GATTTGataa ttattataaa tattataaGG AATATAACCA 001120
001121 TTATCGCTAA TTCCTCTAAG ATCCCAAATA AAACAAGAAT AATAAGATAA AGATATACCT GTTCACACAC ATGCATAAAT 001200
001201 ATCCACAAAT AACTCTTCCT CCAGGATACA GGCTGATTAC TGATAATGAG ATGTATCTTC CAGCCAATAT ATTTAAACTC 001280
001281 TTATTCTGAC TGATGGCCTG TCTTAGGATT TGACAAAAAT ATTCTTGTAA AAATAGATTT AACGATATCA ATTCTGATAA 001360
001361 AAGCAGAACC AAGCTTGGCT TTGAGACAAG AAATTCTAAG CCCCAAAGCA GAAACCTATT TAGGAAGTTA AAATCATTAA 001440
001441 TTAGCTTTTC TGGTTTTGTC AGAAGCTTTA TTTCATTGAT GGTTTACTGC ATCTACTTAG AGCCAGTTCT TAACTGAAGA 001520
001521 GTGACATTCC ATAATAACAA TAGGTTTATG GTAATTATTT AAACTTAGTT AAATTTTGCG TATTACTCTT AAAAAAGTGT 001600
001601 GTGTGTGAGA GTTTCAGAAG TAATGAAAAC CTGTTTTGCA AATATAAGAT ACTCCAGGTA ATATTGTAGA CTGCAAAATG 001680
001681 TATAGTGAAA AACTAGCTTC CTAGTGCCCA TTGTGGTTCT GCCATCATTT ATTTATTTAA CTATGATAAA GATATTAACA 001760
001761 ACTAACCCCT TTGATAATCA CTTATGTATG AAGCATAGAT TTTCCCAGGG GATTCTATAA CAAGAATCTG AAAGTTGGCA 001840
001841 AGGGGCAGAG AAAGCAGTGA GTTAGTCATC ATTGTACTTG GAGGAAACAA AAGCTGATGG TTAAGTTATC TGTGTATGTC 001920
001921 TCAGAGAAGA CAGGTAGGTG CATTGTGAAT ACAGACTATG GTGAGGTAGA ATCTCCAGTA TCTGTCTCTA GTTTGGACTT 002000
002001 AAAATATACA GATCATCATA AAATTTCAAA TTAAAACACT TGGTTTAGGT CCTAAGGAAA TTGGCAGGTG GCTGCTAATT 002080
002081 CTCGTAACAA TCATCTTGAG GGCTCATATT TCCTCATCTT CATACTGTGA TGTAAATTTA CTTTCTTGTC TCAGCATTAT 002160
002161 CAGAATGCAT TAATAAGACT AGAGGTAAAA ATTTATGAAC TGAAAGCACA TAAATACACC TTGAACTGAA GAAGAAAATT 002240
002241 TTCATTTATT AACATCTATA GAATGTGATT TCAGAGGCAT TGAGCATATC TCTCCTATGT TTTACTCTCC TGTTTCCTGA 002320
002321 GCCTAAATAT CTTCTCCTTT AAAATATGAA CTCTCCAGGA CAGGCATGCT GATTTGATCT GTTATCAGCC TTAGGAAATT 002400
002401 GAGTGTAAAC AAAGAATTAG AGAGAGGATG GCAAAAGGAA AGAGCTGACT GGAGACAGTA AAATATCACA CAACCACCCA 002480
002481 CAATGGGGAG AAGAAACAAG TGTGAGCTTG AGAAAGGACA TACATTGATG ACTAGAGTGG AAGGACAACT TCAAATATAA 002560
002561 GATATCCTAG GTAATATTGT AGACCGCAAA ATTTACAATG AAAAACCAGT GTTCCAATTC AGAATTTTGA TATAAATGCT 002640
002641 AATAAACCAG TGGATAAATA AACTTCTTGA CCAAAGGCTT TGTTTAAAAT AAATAAATAT CCTCCTTAAA AATTTATCAA 002720
002721 ATTGACAAGC ACAATAAATT ATGAGAATTA CCATTTTGCT TTATATTTGA CCTTAAAAGT AGAAACCATT TCCTGGTTTA 002800
002801 TTCATGTTTG GACAGATGAC ATTTGTGTGG CTGTATTTCC CAAATTATCT CTTTCTTCTT TTCTTCAAAC TAACCATGCA 002880
002881 TCTGGGGACA TTCAAACACA CCACATTTTA GCTATCACGT ATGAATGATC CATTTCTGAA AATCTTGGGT GTGTAGGTGA 002960
002961 AATGAGGTGG GGGTCCAGTA GGTAGACATC TTCAAAATGT GATTCTTGGA GAAATTTCCA GGGCTATATC CATCCCATCA 003040
003041 ATAGGGCATT GAATTAGGGG ACCTGGTCTT TGTTTCCAAT TGACAACAGT AGAGATTAAC TACAAGCCTT CCCAGGTGAT 003120
003121 ACATTACTTT GAGATACTAT CCAAAATTTA AGTTTCTTAA GTCATGTAAC CACATGGTCA TTGACATAGT GTGTATTCAA 003200
003201 TGCTAATAAT GAAACTGCCT GTCATTATAT CCCTTTGCTT ATGAAGAGCT AATTTGTTTT GTGAGCATAA AAAATTTTTG 003280
003281 AGGGATTGGA CATATATTTT AAAGCTAGTT AATTATTAAT CAGTTTTTGC AGAACTCTAT AGAATAGCCA CACTTGGAAT 003360
003361 CATCAAAAGC AATATTGTAA GAAAGAATTT AAATTAAGAG AAAGAAAATC AACCCACATT AACTTGTCAG ATTACGAATT 003440
003441 CCAACAAAAA ACACTGGGAA ACCATGGTCT TGAGCCAACC ACCAACTCTA GAGTAGGTGC AGGGATTCTT TCTGTTCCCC 003520
003521 ATCAATAGTA CCTTGACTAT ATCCTTGGCC ACATGCCCTG CTCCTTCTGT GGCTCTATCA ATTGTGTCTT TGACAACTCC 003600
003601 CTCATTAATG CTCTTTTGAA AAATAATTTA AAGCTCTCTT GAAGATAACA AATACTTCTT GCCCTAAATC CCTCCCCCGA 003680
003681 TCCATCTTTT GTAGCAGGTT AACCTCCTGT GCTCAAAAAC ATGCTTTCCA CTTTCTCTGC TCAGAAGGAG GGAGTTGGAA 003760
003761 GCTGCCCAAT CATACTTAAA AACAAAAATG GCAGGTAAAT TTTATCAGTC TTGTGCAAAA AACCTATAGA AGAGAGTGGG 003840
003841 GCTAATATCC TGCCAGCTGG AGCAAGTCAT TTCACAAATT TAATATAATT TTCTCTACTA AAGTGCTTAC TAAATTGAAA 003920
003921 AAAAATACTT TTATTAGTAA TTGTAATTCT GCAACTGTGT TCAGTAAGTA CTTTTGTACC ATTATCATTC AGAAAAGGTG 004000
004001 AACAGGACCC AATTTATGGC ACAATCTAGC AATCAGTCCA AATTCACACC CAGTTTCCAA GTTATTTCTC ACCTAGGAGT 004080
004081 TGCCTTTATT CTCAGAAATT TTCCACTGTG GTTCTGAAAT TGGTCTGGCT ACTTACTGCA AGATGTGGAC CTGTCTTAAG 004160
004161 CTTATTGTTA ACCGACATAA AATTCTCTTT AGAAATTTAG CAGTGGACTT TCATACATAT TTCATGAAAT TTCATTCCAT 004240
004241 GTTAGGCCCA AACAAATGAG ATCAGTTTCA TTGGCTCAGC TTCCCTTACA GATGACAGTA ACCATTCACT CTTAGAAAAG 004320
004321 AAGACAGAGG CTGACTTTAG GGAAGGCATG TAGAGATATT TGACAAAGAT ACTTGGATAT GCAATGAGAC ATGATTTGAT 004400
004401 ATGATTATTA CACTAAAATA ATATCACATA GGCTATCATT TTATTAGATG GAACACTGAA ACTATTGCCC CGGAAAGGCA 004480
004481 CTGAATATTT ACCCCAACTC TGTATTTACT TCCATCCATA CCCTAACTAG AGAAGGAGCT AGAACTTGGA TTATCTCAGA 004560
004561 AGAAACCCTA AATCAAGAAA GAGGTATCCT GCAGAATATG GGGACTTATA AGTAATTTCC TCTGTCCACA ACAACATGAA 004640
004641 TTCTGTCAAC TTAATTTTTC AGATCCAGAG AATTTCAGTA GCATAAGGAA ATCGCTATAG ATGCTATTGG CAACTCATCT 004720
004721 ATCACCCATG TACTGTACTG AGGTAGTTAG CAGGTCTCCA GTCCACGGCT TTTCCTGAGA GCTTTTGCCG GAGACCTGGC 004800
004801 TGTCTGTTTC TTTGCTGTAA ACTAGTCAGT TTAAAAGTGG TCCTAGGAAT GGGACCTGTT CAGGAAAGAA TGGATTTTAT 004880
004881 GCCCTGCTTA TTGCCTTCCA AATGCCAGGA GCTTTTCAGA GTAATAACAA CTGGTGTAAA AAGAGAATTT GAAATAAAAG 004960
004961 AAGCTTTTAT TGCCCTAGAA AGAGGCTGCC CATAAACTTT CCACCTGCTT TAACCGCTGG GGAATGTGTG GGTATCCACG 005040
005041 ATTTCTGGCC AATGAGAATT TACCTTTCCT ATTAGCCTCA TATCCTCCAG AATAATGTAC ATGATAAAAA ATGGAGCAGG 005120
005121 AAAACAGGAT CAAACCCCTT TAATTGCAGT TGTCAAATGT ATTCCAGCCT AGCACTTTAC ACATTCTGTC ATCAAGAGGA 005200
005201 CATTTTACTG CTGGTGCTGA TGCTTTACTC TTATGCAAAA TCTTTCATCT TGGAATATCA AAGATTTCTA CAAACACTAA 005280
005281 TTCATTAATT AAGCCTCCTG ATGACTGTTC ATAGAAAACA GGAAAATGTA TTTCAAAATG AAAGAGATTA AAATTCAGGT 005360
005361 TGTTTGGGTG GCAGCTTCAG TGAACAAAGA ATGCCATTTC ACCGGTGTCA TTGTGACCCC TCACAAATCA GTCACTGCAT 005440
005441 CCAAAACAGG CCTTTCTATA AAAATGCAAA CATTTTTCAG GTGAATGTTT CACAGGTTTG TCTTTAGTAT CTAATGAACC 005520
005521 TTCTTCGTGG CACTCCGTCA AATCATTTGT CTCTAATTCT GTTGTTCCTT TGTTCTCTTT CTCTAATAGA ATGTGAAACC 005600
005601 TTACGAACTT GCTGAGATTT ATTGGTTCCC TTCAGAGTGG CTGTAGAAAA ACTGGTGTTA AAACCCCACC CATAGGGAGA 005680
005681 GGGAAACCTG CCCTGCATCA AAGACAGGTT TTCAAAAAAG CTGCCCTCAA AAGCAAAGGC AATAAAAATA TTTGGCTATG 005760
005761 TTGGTCTTAA GTAGTTAAAA TGTTGAAACT CAAATCAAAA TAAAACATTA TCACCTCAAA TCACTATATA AATAAAAGAG 005840
005841 ACCGGAGAAT GTTTTCTACT CTTCTATCAT TCAATAAGTA TAATTTAAGT AGAGTCCTGG CCAATCCAGT GCCAGTGTGT 005920
005921 GGCTGTTTCT CAGGAGGTTT TAAAGTCCAG CTTGGGTTAA TGCATGCTCT TGCCTAGTTT GAAAGAAAGG TCGATGAGGC 006000
006001 ACAGGAAAAG GTACGAGAAA TGTGTGCTGA AAATTCTACC GCCTCCCTTC CTAACTGGAA TACCACATGG GATTCTAAAT 006080
006081 CCTACAATTT CTGAATCCAT TCAAATGCAT TTGAGGTTTG CCAGTATCAT AACCAGTAAT GTAAGGAAGA ATTTCATTAC 006160
006161 CTGGTCATAA ATATTCCCAT GAAGTAGTCT GTAAACCCAT GCTTAGAGAG CCCCCATGAC TAAAACACTC AACTAACATC 006240
006241 TAGTGCCTAT AAGGTACAAG GACTGTGTTG GTATCACCTT TGACTCCTCA GGGTTTCTAG AAATTAGAAC CCGGGTCTAA 006320
006321 AAATACACAC TTAAAATTCA ATTATTTTTA CTAATAATAA ACTAATTTTC TAACTTTCTC TCTCTCCCTT AGCACTGTCC 006400
006401 CAataatgta gcagagtgaa taaaag
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Predicted Small Protein

Name NONHSAT059033_smProtein_5963:6169
Length 69
Molecular weight 7943.4353
Aromaticity 0.0735294117647
Instability index 44.8014705882
Isoelectric point 11.0043334961
Runs 7
Runs residual 0.037559618442
Runs probability 0.0178792237616
Amino acid sequence MLLPSLKERSMRHRKRYEKCVLKILPPPFLTGIPHGILNPTISESIQMHLRFASIITSNV
RKNFITWS
Secondary structure LLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHH
HHHLEELL
PRMN -
PiMo -