NONHSAT059035
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059035 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1582 nt |
Genomic location |
chr18+:37326676..37328257 |
Exon number |
1 |
Exons |
37326676..37328257 |
Genome context |
|
Sequence |
000001 TAGAGCAATT CAAGCAACAC TAATCCTTGC ACACTTTTAG ATTCTGAAAT GATCTTTTTT TTCCCTGCTA CCATATTCCC 000080
000081 ACTCCTAGTC AAGGGCACAG CAAATTATCC TCTATCTGAG TCAGAAAAGT AAAGCTCACC CTAGATTCCT GACTTGCCAC 000160 000161 TAATATTCAA CGAATCAGAA AGTCCTCTTT CTTCCAACTT CCGAGTATCT ACAATTCTAT TCTTTATCAT TATTTAGGTC 000240 000241 Agatctcccc catgtctagt cctacctaat ttgcaccact ttcctccttg cgtgttgtac tccagactca ctgaaatacc 000320 000321 ttttattttc tcagggtttg tctatgtcct ttgtactttg tccacagtga tccctctgct agaatgacca acagtccccc 000400 000401 aggcttttga gcatgggtct tcttttccag aaatttttcg gcagtttttc tcccttgttg gattgtgtgt ctattctttg 000480 000481 ggttcctttg gagtccctgc tgtattatat catatcacta accataatat gaagtaattg cttatatatg tctctgcttt 000560 000561 ctttgagaga tcctaatctc cttaagagaa gTAATTACCA CCACCCCCTG AACAGAAAGT TCTGTGCAGA AACTCTTTCA 000640 000641 GACTCCCTAT TCCTCTCata gtgcatgaca catatgaggt actcaacaac tatttAGAGG AGACAATAAT ATTTTAACCA 000720 000721 ATGTTTTCAA ACCAGAGGGA CCCCAATAGT GTACTTTCTG ATAACATGAA CTCTGGCCTT AAAAGAGAAA AATTAGGAAT 000800 000801 AGTCAACATT GAATTTCATC TGATTATATT TTATTGTAAT TTTTAATGCA TAAGTATTTA ATATTCCCCA AATACACCGT 000880 000881 GAATGGCTCC TCCCAGATTA AGAATTCTAT CTATTAGGGA AGATGACATT tgctatggct tggatgtggt ttgtccccat 000960 000961 taaaactcat gttgaagttt aatggccagt gaagcagtgt tggggagtat ggtctaatgg gaggtgtcta gctcacagaa 001040 001041 gctgatccct catgaatagg ttaatgcctt cccataaaag ttagtgaatt ttcactctta tgagactaaa ttagttacca 001120 001121 gaggtcgggt tgtgataaaa atgagtttgg cttcctagac attctcttat ttcccctctc accatgggat ctctctgcac 001200 001201 atgcctgcct actcttctgc ttctctgcca tgtttcaacc cagcacgtgg ttctctccag aagctggaca gatgagatgc 001280 001281 tatgcttttg aactcccagc ctgtagctgt gagcctgtag ctcacaaatt gtgagctaaa taaatctctt ttctttgtaa 001360 001361 attacacagc ttaagtattc tgttatagca acacaaaaca gactaagaGG gaaaattcat actgaggagt gggatgctgc 001440 001441 tataaagata ctataaagca gctttggaat tggttaagga gtagtgactg gaaaaatttg gagcagacta caaaaagcct 001520 001521 gaattgccat aaatacaaca ttaagggtga ttgtggtgag agttcagaga aagacaacaa ag |
Predicted Small Protein
Name | NONHSAT059035_smProtein_1229:1333 |
Length | 35 |
Molecular weight | 3863.4439 |
Aromaticity | 0.147058823529 |
Instability index | 86.5382352941 |
Isoelectric point | 5.47735595703 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0178943649532 |
Amino acid sequence | MFQPSTWFSPEAGQMRCYAFELPACSCEPVAHKL |
Secondary structure | LLLLLLLLLLHHHHLEELLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |