NONHSAT059086

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT059086

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2079 nt

Genomic location

chr18-:41903166..42111662

Exon number

6

Exons

41903166..41903176,41903401..41904569,41905117..41905393,41906212..41906447,42098190..42098333,42111421..42111662

Genome context

Sequence
000001 GCACTTTTCT TTGTGCATTC ACACGATGCA TTTTCTTTTC TTATCACCAA ACTGTTTTGA AAGATAAAAG TACTTCCTGA 000080
000081 ATATGTGGAT GGTGAGCCAC GTGAATGGAA GACATGGAGA TACGGACTGT TAACACCTTG TCAAACATTT ATTGTCCCTT 000160
000161 CCACCTCTAA ACTTCTGTGA TAATAGGTGA ACAGGACCCA CGTGGTGCAG AATACTGCGA TACACACTGC GGAATAATTC 000240
000241 AGTGCAGAAC AACACGTGGA TTGCTCAGTA CAACTTGTTC ATCACATCCT CCTGTTCACT GAAGAATTAT GGGAATATTC 000320
000321 TCTGAGCTGC TTTCCTCCCT GCCCAACGAG TCATCTCTGT GTGAAAGGCC AAGCTTATAA ATCCTGAAGA AAGAGACATT 000400
000401 ATACAAATGC AAGCTGTTGT CACAACAATG ATAAGAAATC AGGAGTCGAA AGATGTGGAG TAAGGGGGAA TTTCAGAGAA 000480
000481 ACCACAAAAC ACAAAATAGG AAACAGAGAC AGGAGAAGAT TGCTATGACA AAATTGCAGA AGGTGAAATC TTTGGCAGCC 000560
000561 TCTTATTTCT CTGGAGAATA TGATATTGTC AGGCTGAGGT GGAAGAATCA CATGGTCATA CTGTTGAAGA GGTCTTGAAA 000640
000641 CATTGGGCTT TCCTCTACAA GCGGAAGGAT AGCACTGGCA GCCATCCACT GGCCCAGCAA TATCCTGGAT TGAGACGATA 000720
000721 TCATTTGCAT TACTTGCTGA ATGAAACATA GTGAAAATGA CTGCAGATAA CCTCAACTAA GTCCAAGATA TCATTTTCAA 000800
000801 ATCTGGACCA GCCCTTGCCA TCTAGACTGA ACAGAGATTC CAGTTTCCAG GAGAGTAGAT GGAGTAATGA TAAAAGCACC 000880
000881 TCCCAAAACT TTTGCCTTGG TACTACAGAG TGGCACATAA CTAAACATTA TCAAGGAATT TTACAGCCCT AGGCCTTCTA 000960
000961 TTACTGTGTA TTACAGTCTG CTGTAATCAT TCTAATGGTC TAAGATGTTG CAAGTAATTT ACTCACGGCC TGAACACCAG 001040
001041 AAGTGCCAAA ATTGCCTGGG AGTTTTATTC TGCATCCAAC CAGTACCAGG AAGGAGGATG TATTACTTCT CGTTTCTCTA 001120
001121 CAAGTGTCAG TGCAAATCCA GCCATCAAAC AAAACTTAGA CCTAAAAGCT TTTAGATTAC AGCGATTATT GCAGATTTTA 001200
001201 CATGAGATAA AAATGTAATT GCTCCATTTC CTTTATTCTT TCTTTCATTT TCTTCCCTCT CACTGTATAT TTTAGATTGT 001280
001281 CCTGCTTGAC TGCCAGGTCA GACCCAGCAC ACAAAGATAT CTGTCATAAG ACTGGGGAGC TGCAGTGTTC TTTTTCATAA 001360
001361 GAAATGAAAT GCTTGAAATT TCTCTTCCAA ATGAATCACA AAACTTCCAT GGTCATTTTC ATTTTAAATT ATTTTATGTC 001440
001441 TATGTAAACT CATGCATTGC CTATAACGGA ATAATATTCC CGGCCATGTG GATAGTGACA GAGAATGAGC TGAAGGCAGC 001520
001521 AATACTTCAC AGGCAAAGTG GTACATGCAT TTTTTTTTCA TCTTGCTTTT TTCCTTTTCC ATATTCACTC ATCCTTTTAA 001600
001601 ATTCTTTGAA TCTACTTTTT CCTCCCTCGC TCCCTTCCTA TCCTCCATCT CTATCTTTGT CATTTATTAA TTCTTTTTCT 001680
001681 TCTTTTTCTC CAGACTTGGA TATTTCTCTA TCCTCTCATC ATTCTCTTTC ATACACATTC TCTGACTTGT AGGTCCTAAG 001760
001761 ATTCTCATAT TCTAAAATTA ACCCTCTGCT TAACAGGGTA TGTTTATAAA CCATTGGACT GAGGAGGAAT TGCCCAAGTT 001840
001841 ATCAAAGACA TCCTATCAGG AATGTCAGCC TTTTACTCTC ATTCATGCTC AGAGAAACAG TGCTGCAGGG ATTATAGCCT 001920
001921 GGAATATGGC AGAACCAGAT TTTAAATTTG TTTGCCCTTT GCCTCCTAAT ATCCATTTTC CCCTAAGTTT AACTGGGCAT 002000
002001 ATTTCCCAGT TTGCCTTGCA AATGTGTTGC CATATAACTG CACTTTGTCT AATAAAATGA AACTGAGTAA AAAAAAAAA
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Predicted Small Protein

Name NONHSAT059086_smProtein_1799:2059
Length 87
Molecular weight 9813.4093
Aromaticity 0.104651162791
Instability index 67.0406976744
Isoelectric point 6.48150634766
Runs 15
Runs residual 0.034796945505
Runs probability 0.0375022080905
Amino acid sequence MFINHWTEEELPKLSKTSYQECQPFTLIHAQRNSAAGIIAWNMAEPDFKFVCPLPPNIHF
PLSLTGHISQFALQMCCHITALCLIK
Secondary structure LLLLLLLHHHLLLLLLLLHHHLLLEEEEEHHHLHHHHHHHHHHLLLLLEEELLLLLLLLL
LLLLLHHHHHHHHHHHHHHHHHHEEL
PRMN -
PiMo -