NONHSAT059248
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059248 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
895 nt |
Genomic location |
chr18+:47176902..47179864 |
Exon number |
3 |
Exons |
47176902..47177129,47177969..47178098,47179328..47179864 |
Genome context |
|
Sequence |
000001 ATAAGAGCCA CATCGTAACT TTGTGACTCG CTGCTGCCAG GGCCCCAAGG AAGTGCTCTT CCTGGGCACG AACCCAGGAC 000080
000081 CTTTTAGCAT GGCCCAGACA TGAGTGCCCT TTGAGGAAGT GAACATGGTC TGGGACTGGC TGGGCATTGG AGGGCCTGTG 000160 000161 CTAACCCCTC CCCAAGAGCA CTGTCTTAGC TGGGACTGGG GTGCTGGGAC TGGCGTGCTC AGTGAGAGGG GCCAGGACAA 000240 000241 AGCATGGGAC AAGAAATTCA GAGTGACCTT CTCATGAGAG GCTGAGGCTG GCTCAAAGAA TTCGGTGCGG CAGAGTGAAa 000320 000321 gtcagaagac ctggattttc atcccagctt tgcgacttag tggaagcctt ggaaggtctt ggctgtatgc aggattcaca 000400 000401 gctttgacgc atgcgtgccc taggcccagg cctcagctcc tgtccctgtt ggtggccatt acatccaaag cttcttaggt 000480 000481 atcaagattg gcagctctcc ccttccacct cccctgcatc cagtgcagct gcccccacga tctcctgctt ctttggtttc 000560 000561 agtttgcttt gctttccttt tggctgcagg atttcccttt ctttagcaaa gctcagttag tgcatttgaa agcctgttca 000640 000641 ttaccttttc tctaccactt ctaggtgttt ttagagcaga aagctttcta tgtttcctag tctgccacac tatcagaaat 000720 000721 gtaagtctct gtgatacaat ttctctctat taaactagca aaaatgtagc aggggcatgt gcaagggtga gggaagtgct 000800 000801 cacattctcc tgatgggaat ctgaattgct actcaattcc tgacagtatt ttgcaataaa aaatatgaaa aaatgatgca 000880 000881 tgtcttttgt cccag |
Predicted Small Protein
Name | NONHSAT059248_smProtein_410:619 |
Length | 70 |
Molecular weight | 7505.7629 |
Aromaticity | 0.130434782609 |
Instability index | 57.2289855072 |
Isoelectric point | 9.06695556641 |
Runs | 9 |
Runs residual | 0.0088965418281 |
Runs probability | 0.0318946397378 |
Amino acid sequence | MRALGPGLSSCPCWWPLHPKLLRYQDWQLSPSTSPASSAAAPTISCFFGFSLLCFPFGCR ISLSLAKLS |
Secondary structure | LLLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLEEELLLLEEEELLLLLE EEELLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHH HLLLLLLLL |
PiMo | oooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTT Tiiiiiiii |