NONHSAT059260
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059260 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
551 nt |
Genomic location |
chr18-:47566622..47623990 |
Exon number |
3 |
Exons |
47566622..47566684,47581638..47581748,47623614..47623990 |
Genome context |
|
Sequence |
000001 GAAGCCCTAC ATTCTGCTGC TGCTGCAGAG TGAtgatttt taacagacca gaacttacac atctaaatga gtgttgttgt 000080
000081 tcagtgaagt caccttagga caatgattta aataacaccg cgatttctca agaagtttgg aacttctctt atggttgagt 000160 000161 tcaaagccat tttatgTTAT ATGTGGCCCA AACAAGTttt attagtacaa ttaaatcttt attgaggact tttgatggac 000240 000241 cacatagtga acttggactg ggaatcaaaa gaatggtaag gcagggtgtc tgccttcact gtgcctgcag tctggctgag 000320 000321 atgcacatgt gagccacact agcacaagcc agcatgCACT GGCCTGTCAC AAGAGAGTGC ACAAGGGTCT GGATCCCTGA 000400 000401 CCCTGATGAG GTATGGCGCT CAGCTGAGTT AACCAAGGAC TACAAAGAAG GAGACAAGAG CCTACAGCTC AGACTGGAGG 000480 000481 ATGAAACGAT TCTGGAATAC CCAATTGATG TACAACGCAA CCAGCTGCCC TTCTTACGGA ATCCAGATAT C |
Predicted Small Protein
Name | NONHSAT059260_smProtein_173:331 |
Length | 53 |
Molecular weight | 5781.8635 |
Aromaticity | 0.0576923076923 |
Instability index | 50.2057692308 |
Isoelectric point | 8.63482666016 |
Runs | 9 |
Runs residual | 0.0227075184702 |
Runs probability | 0.0471648118707 |
Amino acid sequence | MLYVAQTSFISTIKSLLRTFDGPHSELGLGIKRMVRQGVCLHCACSLAEMHM |
Secondary structure | LEEEELLHHHHHHHHHHHHLLLLLLLLLLLHHHHHHHLLHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |