NONHSAT059497
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059497 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
875 nt |
Genomic location |
chr18-:56065560..56067251 |
Exon number |
2 |
Exons |
56065560..56066411,56067229..56067251 |
Genome context |
|
Sequence |
000001 TTATACGTTT TTAAATTTCA GAGGTGCTCT TTCCACATCC TTCCTCGGGC CAACAAGGGG CAGGAATGGA AATACCCGGG 000080
000081 ACCCACAGGC AGCTGTGATA ACTGATGTTA AGAGAACCGC AACAGGCAGT GTGTGAGCTC CGGCACGTAC TTCTCAGCCT 000160 000161 CATGTAAGTG GCCCATAATA ACTACAGCTT CAGCAGACAA CTAAAGAGAC TGCATTAAGG TGATTTCTCT GGCTATAAAG 000240 000241 AGAGCCCGGC CTGCAGAGCA GTGTGACTGC TGGGACCTCT GGGATAGGCA ACACTGCCCT CTCTCCCCCA GGGCTACTCC 000320 000321 CCGGGCAGGT CGGGGCCCAA GGAATGACCC AGCAACTGCT CCTTACCCAG CACACTCTCT TTACTGCCAC CTGCAATTAT 000400 000401 GCTGTGAAGA TGACTGGGTG TGGTCATCAC GATTCAGAGA AATCAAGATC TATGACCATT TTAGGCAAAG AGAGAAACTT 000480 000481 GGAGAATTGC TGAGGACTAC TGAACCTTGT TTTGCTTTTT TAAAAAATAC TAAATCCTCA CTTCAGCATA TTTAGTTGTC 000560 000561 ATTAAAATTA AGCTGATATT ATTAAGGGGT TGATGAACTG AGGTGTCACT CACAATTACT GCCTTCCAAG TATTCATGGG 000640 000641 GTAGATTTCA GTAATTCTTG TTTGCTTCTG GCTTAGAAAT TGTCAGAATG ATTTTTCTTT TATACTTTCC AATACTTGAC 000720 000721 TTAATATGCA TTTAGTGACA TTCTGTTTTT TTCAATATAC GGTTTACAAG ATGACAGAAG AATCCCAGTT CTTAGGTTAG 000800 000801 AATTGGATTT CTCCCTCTAC AATTACACAA TTACTCTCAA AAACCAAGAA AGCATACTGC TCGACTCAGG CTCTG |
Predicted Small Protein
Name | NONHSAT059497_smProtein_725:799 |
Length | 25 |
Molecular weight | 2950.4073 |
Aromaticity | 0.25 |
Instability index | 72.1333333333 |
Isoelectric point | 5.38043212891 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0087793676029 |
Amino acid sequence | MHLVTFCFFQYTVYKMTEESQFLG |
Secondary structure | LEEEEEEEEEEEEEELLHHHHLLL |
PRMN | - |
PiMo | - |