NONHSAT059524
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059524 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1337 nt |
Genomic location |
chr18+:56357588..56359385 |
Exon number |
2 |
Exons |
56357588..56358836,56359298..56359385 |
Genome context |
|
Sequence |
000001 GCAGATCAGT ATGGTGCCGC TAGGCAGGCA CTGACTAGCT CCAGGCAGCT CAACCTTGGG AGCTTCGGGG CCCCGAGAGG 000080
000081 TGGAGCCTGT GAGTGGGGCA TGCACTCCAT GTGGAAGCCA GAGCCTCCTC CCCTGGATGG AGTGTACGAG ATCCCTGGAC 000160 000161 CGGAGCCCAT CCCCTCTGTG AGAGAGATGT ACTTCACGCC CGGGCTGCCA CCGCTGATCT TCCTGCCCTG GGACCCTGGG 000240 000241 TAGAAACACC CAAAATTCTG TTCACCCCGT TCACGACCCT GGGACCCTGG CTCGAAGCAC CCAAAGTTCT GCTGCTCAAG 000320 000321 CTCCATTCAC GAGCAGCCAC CATACAAAGA CCAGGCCTGC TATGTCTTTC ACCAGCGTTG CCGCCTTCTC AGGGGTGTCA 000400 000401 AGCAGGCCCT CTGGCTTACC GAGGCCAAGT TAATAAAATG CCTTCCTGAG AAAGTACTTG GCCTTGTTGA TGATACAAGG 000480 000481 AACCACATAG AGAACCAAGA TGAGCGTCTT CTGAATTTGA TCTCTCATGC CTGTCTCTGG CACTGTACTG AGTACGGCCC 000560 000561 CAGGAGAGAG GCCTGCTGTC TGGTCATTGT GGACAGTCTG ATAAAGTTGT GTAAGTCTCA GATTCTCAGG CATCCTTCTC 000640 000641 TGGCCAGGCA GATTTGTGCC CAAAACTCCA CGTTATCCAC CACCTGGAAT TGTGTCTGTT CTTCAGGGTC ATGGTTCTAG 000720 000721 TGGAGCCGGC TGAGTGCCAA GGATCCTCTG CCCCCGCCAT CTCCTCCAGA GAAGAGGTTG AAGCTACTAA AAATCATGTT 000800 000801 CTCGAGGCCT TCTGTCCCCT CTCCCCACTA CTGATCTTCA GGAATGCAAT GTTTCTGATG TGAAAGATGA CACAGGATTC 000880 000881 TGGGAGGGCT ATCCTTACCC CTATCTCCAT ATCCTGCACT TCCTGGAGAA AGCCGATTTG CAACCACATA GCCTTCAACC 000960 000961 AGATCAGCTG TGGGCCAAGA TGATCCTGTT TGCTTTTGGC ATTGCCCTGG CTCAGGCCCA GCTCCTCTGT GGCAATGACA 001040 001041 CCAAGATCTC GGAGCAGCCC GTGGTTGTGC AGAGTACATG CACAGACGGA CGTGCATTCC ATTTCCTGGT GTTACAGTAG 001120 001121 AACACCACAG ACCTGGCCTC TTAACAAGTG TGGCAAGAGT TTGGTCTGGG TGGAATCATG CCAGCTACTC TCTCAGCATT 001200 001201 TTTGGTGTCT CCCAGTGATA AAAAAGAAGG TGGgaccggg cccagtggca aaGAGGGTGG TTGTGGAATG CGTTGGGCTG 001280 001281 ACTGGTTTCC AGTGGGAGAC ATCCAGGAAG TTTTTAGCTC TGTATTTACA TGGTGCT |
Predicted Small Protein
Name | NONHSAT059524_smProtein_710:862 |
Length | 51 |
Molecular weight | 5478.3666 |
Aromaticity | 0.06 |
Instability index | 65.672 |
Isoelectric point | 4.75030517578 |
Runs | 7 |
Runs residual | 0.0246783625731 |
Runs probability | 0.0296767355591 |
Amino acid sequence | MVLVEPAECQGSSAPAISSREEVEATKNHVLEAFCPLSPLLIFRNAMFLM |
Secondary structure | LEEELLLLLLLLLLLLLLLHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHL |
PRMN | - |
PiMo | - |