NONHSAT059557
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059557 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
576 nt |
Genomic location |
chr18-:56998008..56998871 |
Exon number |
2 |
Exons |
56998008..56998361,56998650..56998871 |
Genome context |
|
Sequence |
000001 CTTGTTTATA TAGCAAACAG TTTTATAAAG ATTTCACATT TATTTCTTTT TCCAAACTGC TATTTTGACT AACTGTAATA 000080
000081 GAAAGTCATT TGCCTTACAG CCATCAAATG AAAAGCCGAA ATGCCCAGAA CTACCACCAT TTCCATCATG TTTGTCTACG 000160 000161 GTCCACTTCA TTATATTTGT TGTGGTGCAA ACTGTATTAT TCATTGGTTA TATCATGTAT AGGTCTCAGC AAGAAGCAGC 000240 000241 TGCCAAAAAA TTCTTTTGAC TACCATTTTC CTGTGTACTT CATCTATTTG TGTACAAAAT GATGTCGTTT TGAGGGAATT 000320 000321 TAAGTATTTA AATTGCTTCA TAGTCtaaat tattaatttt cttaataaaa taaCTGTTTA AACATTGATT TGCAGTTAAG 000400 000401 AATAAACCTT AAAGCAAAGA CAACCACATT TTAATTTGTT CACAGTATGT AAATCTGTCT AAATTTCAGT GAATTTCTGG 000480 000481 TCAGTATGAT GCAGCCTCTG AGCAGAATAT TGACCAGTAA GAGGGTAAAT AAAGTGGGGG CAACCCCTGG ATATGAATGT 000560 000561 TACCCCCTAA GTCTCC |
Predicted Small Protein
Name | NONHSAT059557_smProtein_107:301 |
Length | 65 |
Molecular weight | 7749.0484 |
Aromaticity | 0.1875 |
Instability index | 56.2421875 |
Isoelectric point | 9.47698974609 |
Runs | 8 |
Runs residual | 0.02359375 |
Runs probability | 0.0686164105281 |
Amino acid sequence | MKSRNAQNYHHFHHVCLRSTSLYLLWCKLYYSLVISCIGLSKKQLPKNSFDYHFPVYFIY LCTK |
Secondary structure | LLLLLLLLLLEEEEEEELLHHHHHHHHHHHHHEEEEEELLLLLLLLLLLLLLLLLEEEEE EELL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL LLLL |
PiMo | ooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiii iiii |