NONHSAT059621
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059621 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
555 nt |
Genomic location |
chr18+:59895673..59921944 |
Exon number |
6 |
Exons |
59895673..59895831,59898427..59898502,59899565..59899660,59911997..59912109,59919897..59919987,59921925..59921944 |
Genome context |
|
Sequence |
000001 GGGAAAAAAC ACAGACATCC ATCTTTCAAT ATCAGATGAA GCTGATTCCA CTATTCCTAA AGAGAATTCC CCAAATTCAT 000080
000081 TCCCCAGGAG AGAAAGAGAA GGAATGCCAC CTTCTTCTCT ATCAAGTAAA AAGACAGTTC ATTTTGATAA ACCTAATAGG 000160 000161 AAATTGTCTC CTGCATTCCA TCAAGCACTA CTCTCTTTTT GTCGAATGTC AGCAGATAGT CGTTTAGGAT ACGAGGTGTC 000240 000241 TCGTATTGCA GACAGTGAAA AAAGCGTTAT GTTAATGCTG GGACGCTGCC TGCCACACAT TGTTCCCAAT GTGCTATTGG 000320 000321 CAAAGAGAGA GGAGTTGATC CCCCTCATAT TGTGTACAGC ATGTCTACAT CCTGAGCCTA AAGAGCGAGA TCAGCTTCTC 000400 000401 CACATACTTT TCAATTTGAT CAAGAGGCCA GATGATGAGC AAAGGCAAAT GATACTGACA GGTTGTGTGG CATTTGCGCG 000480 000481 TCATGTTGGA CCAACACGTG TAGAAGCTGA ACTTTTACCA CAGTGTTGGG AACAGGCATC CAATACATTA ATGAA |
Predicted Small Protein
Name | NONHSAT059621_smProtein_35:226 |
Length | 64 |
Molecular weight | 7454.9759 |
Aromaticity | 0.0793650793651 |
Instability index | 57.153968254 |
Isoelectric point | 9.21856689453 |
Runs | 7 |
Runs residual | 0.0338516358925 |
Runs probability | 0.0430009841774 |
Amino acid sequence | MKLIPLFLKRIPQIHSPGEKEKECHLLLYQVKRQFILINLIGNCLLHSIKHYSLFVECQQ IVV |
Secondary structure | LLLLHHHHHHLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLEEEEEEE EEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLL LLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooo ooo |