NONHSAT059627
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059627 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
650 nt |
Genomic location |
chr18+:59949553..59953206 |
Exon number |
2 |
Exons |
59949553..59949677,59952682..59953206 |
Genome context |
|
Sequence |
000001 GAAAATGCAG TTGGCTTCTT TCCTGGAAGA TCCTCAGTAT CAAGACCAAC ATTCTTTGCA TACAGAGATC ATAAAAACAT 000080
000081 TTGGTAGAGT TGGCCCTAAC GCAGAACCCA GGTTCCGAGA TGAGTGTCAG TTTTAGAATT AGCCTGTCTA Agtcaggcat 000160 000161 ggtgccacgt gtctatagtc ccacctactc agaagctgag gtgggaggat cacttgaggc caggagttca acaccagcct 000240 000241 gagcaacaca gcaagataag tccctacaaa agatgtttaa aaattagcta ggcatggtgg cacgtatctg tagtccatca 000320 000321 actcgggagg ccaaggcagg aagatcactt gagtccaagt gtttgaggct gtggtgcact atgattgcac ctgtgaatag 000400 000401 tcattgcatt ccagcccaag caacagagca agaccccatc tcttaataaa aaagaaagaa TGATATCCAT CTGGGTTATT 000480 000481 ATTAAATCAT CTCCTGGTCC TTCATCTCCT ACTGCTTTTA ACCATCTGTC TACATCTGAG GGGTTAACTG TTAAGTGAAT 000560 000561 TAATTAATAC ATATGTGGTA CCCCAGGACA ATATGTGTGT AGTGAAATCT GAATTCTATA GTAAAGTTCT GTCTGTCTTC 000640 000641 CTGAGAATTA |
Predicted Small Protein
Name | NONHSAT059627_smProtein_293:445 |
Length | 51 |
Molecular weight | 5458.3261 |
Aromaticity | 0.02 |
Instability index | 76.576 |
Isoelectric point | 8.50543212891 |
Runs | 8 |
Runs residual | 0.0046783625731 |
Runs probability | 0.0290474297828 |
Amino acid sequence | MVARICSPSTREAKAGRSLESKCLRLWCTMIAPVNSHCIPAQATEQDPIS |
Secondary structure | LEEEELLLLHHHHHLLLLHHHHHHHHHHEEELLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |