NONHSAT059642

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT059642

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

5421 nt

Genomic location

chr18-:60185101..60190521

Exon number

1

Exons

60185101..60190521

Genome context

Sequence
000001 cgggtctcgg ccggcgaggg gggcggtggc cggccggcgg ggtcgctggc gTCGTCTTCC CGGGCTGGGG GCGGGGCGTG 000080
000081 CCCGCGACGG CTCCTCCCCC TGGGCTCCTC GCCGGTTCTG GGAGCCCGGG TGCGGGTGGG AGCAAGCGAG CGAGGGTGTC 000160
000161 CTCCTTCCGC CTCCCTCTCT CCGCCGTCCG CGCTGAGCCG GGGCGGCGGT GCCTGAGCTG TTCCCTCGCG AGCCGGTGAG 000240
000241 GACGGAGCGG CTGGGTGAGG AGGTGGAGCA GCCGGGCCGG GCGGAGAAGC TTGCGGGCTC CGCGCACCTC ACCTCCGCCA 000320
000321 ATCAGCACCG CGAATCGACG GTGACGTCGC TCTCCCCGCC CCCTGGGGGG CCGCCTTTCT CCAGGAAGCC ACGCCCAACT 000400
000401 GCTGGCCGGC CGCCTCCCTC TCGGCGGCTT CCGTGCGGTC CTAAAGGCTG GTGCTCGGCA GGAGGAGGAC GCGGGCTGGG 000480
000481 GCCGTGGGGC GGCGTGAGGG TAGCCCGGGA GCGGTGAGGA GCGTGCGAGG CCCACGTGAG CGGAGGGACG CGGCCGCTCT 000560
000561 CACCTTTCCT GAGGGCCCTG GCCCGGCTTT GGACTCCTGA TTCTCCTCTG CTTGCCAGCT GCCGCCCCGC CTCCGCCAGT 000640
000641 GGTGCCCGGG CTGCCTGCGC GGCCGGAGTG AACGCGTCCC GGGAGCAGGG GTTTCTCCGA AGTGAGTGCG CCAGCCCCGG 000720
000721 GACGAGCTCG TTCGAGTCCT CACCGCCCAG TGCACTTCCT GAAAGCCGGC GGTGGGCTGT CTCCCACCTT GTGAAACTTT 000800
000801 GCCAGGTGTC GCTCACAGGG GACTGGGTCC GGACGCGGGT GGCGGCGCTG GTTTGCGGCC CCGGTTTGCG GCCCCGGCGC 000880
000881 CGCGATCCCG GGCCGCGCCC ACGCCCAGGC TGGAGGCACC GTGCGCAGGT GGGGACGCGC GGCCGGGAGG TGCGCAGCGG 000960
000961 GACCCGGCCG GCCGAGGGTG AGCGCTGCTG GGGACGCTCC TAGTCTGTAA CGCTCTGTGA AAATTATTTC CTGGATAGTT 001040
001041 TAGGAAAAGC CTCTCCCTTC CCCGCCCCTA AACCTCTATC TTTTGGGAAT CATTGATTTG CTAAATGACA TTTCGGTGCC 001120
001121 TAACCCATTT TGAATCCTTG TTCTGCTGTG AATTTCATGT GACTGGAGGA ATTTAATAAG CTACCAACTT GACAGGCTTT 001200
001201 AAACTTAAAA AAAAAAAGTT TTGTTACGTT TTTCAGATTT AGGCTTCCAA GATGTTTACA CTCGCACTGT TACttttttt 001280
001281 tttttttttt tttttttttA GCAACATAGT CCAAATTTTT AAAACTCAGC TGGATCTTTT GAGGGTTAAT TAAAAGGTGG 001360
001361 GTTAAAAAAA ATCTTAAGAC TTTAAATTTA GAAGTCCTAC TACAGCTATG TAGTAGGAGT ATGCAGAAAG ATAAGAATCA 001440
001441 CATTGTAACT CTTTGCGGTG GTGCTGGAAC ATCTGTTGGG AGAGCATATG CTGAACTCTG TTCACCTCAC AAGTTTATGT 001520
001521 CCTAAGAGGC TCATTCACAG TTCAGTAAAA GGGTGAACTG AAGCCTGAAT CAGTTTCGGG GATGAAAGGG TGAGAGGGAG 001600
001601 AACTGTTTTC AGCACATTTG AGGTTGGCAA AATATATAAA AGTCACTCTT TCTTGTAATT TGCTAGTTCT TTACAGTCTT 001680
001681 TAGATGTAAT TTACAGCCAA GAAAACTTTA TTATGAGGAC TTATACGTCA TTGCCCTTTT TTGCTGTCAC CCTCAACTAC 001760
001761 CCTGGGATCT TCTACTCATA TCTCATCTCC TGTTCCCACT TTTCTAAAGC TTAGGGTGAA ATACTTAGGC AACTAGTAAT 001840
001841 AATATTAATC TTGCTAGATA TTCACAGGTT CATAGTGAGC CAGCTGTCTA GATCTGGATA TCTAGTGAGC AAATAAATTC 001920
001921 TTTACCTCCG AGTTGAtttt tgttttattg atcgattgac acagtcttgc tctgtcaccc aggctggagc acaggctcaa 002000
002001 gcagatcctc ctgcctcagc ctctcaagta gctgggacca caggcacgtg acaccacacc tggctaattg tttgtatttt 002080
002081 tttgtagaga cagagtctca ccatgttgcc caggctggCA AATTGAGTTT TATATGTGAC GCAGTCAAAG GGGCATTTTC 002160
002161 CTTGGCAATA AGAAGCCATT TGATATGAAC TCTCCACAAT AGTTGATGCA TACATTTTAT ACCAGAATTC AAATTTGTAA 002240
002241 TCAATAATGA TTACTTGGGT GTTTATAGCT TTGGCCAACA TTAAACAATA TAGTGATCAA AGCTTATACA CATAAGTGAC 002320
002321 ATATACCATG ATTTAATGAT TTTGGTTATC CATCAGCTGG ACAATTTGTT GTTTATCTCC GTCTCTGCAT ACTGCAGCTC 002400
002401 ACAAGGAGGC CTCAATGTTT TTTCCATGTT ACCATAAGTG AGAGAACACA TTCAGTAAGA GTGAAAAAAC GCTAGTGCTT 002480
002481 TTGAGGGAGG GGCCCCGATG GAAGTCCCAC TGTGACATGT GAGTTTTTAA GCTGGGAAAA CTACCCTGAT GATTCTAGTA 002560
002561 AGACTCCCTA GAAAGGGATT CCTCTTAGCC AGCCTACCTG TTGAGAACAC CTGCTCTAGA TTTTCTGATT TTTTTTTGTA 002640
002641 TTCCCTGCAT AATCAAATCA TGTGGGCCAG ATAACATTAT TGTGATAGTG GTGAGTGTGT GGTTTGTATC CAAATATTTT 002720
002721 ATAAAGAAAT ATATCTTGTA ACAAAAACCA GGACACAAAG TATTATTGTC TCTTGTCCCC AGATGATATA TATATTTTTA 002800
002801 ACTTCCCATA CTACACTGAT GTACCTAGAT GATGTTTAAT GCACATTCAG TATATTGTTT TATTTGCCTT TTTAATAGTG 002880
002881 AAAGGTGTCA TTATTCATAT ACCATGCCAT ACCGTAATAT AGCTGGTATT ATTGTCCAAG TATTTATATG TAACCAGAAA 002960
002961 ACTGATTCCA AGTGAAGGTT TGGATGAAGG CACTAGTGAC GGAGGAGGCT TTTCAACCCT CCTTTTTGCA GCTGGGTTGC 003040
003041 TGCAAGACAT TTCACCAAAA CCTCAGATAA CTGGGTGGTT CAGGGCAGCC TGATACACTA AAATATATCA ACTATAAAAA 003120
003121 GGATGCCCAG ATACGTCCAC TTCTACTTCA GATATCCTGA AACAGGCAGT CTGATTCATA TCAAGAATTT GTTCCCTATG 003200
003201 AGACCCCTCT CCCACTACac ctccctgttt cctccattag aatataaata tcttgaagtc actgaccatg ttttattcaa 003280
003281 tgttatgttt tctcatctgg cacacagtag atgttcatcc atatttgttg aataaatgaa tgaatgaatg aatgaaCAGT 003360
003361 GCTCCCGTAA CAAAAAGTAA AGGCCAGAAA CTCTTGGGTC ACCTGGAACC TTGTTCCTAC CTACCAGGGA AAAGAAAACA 003440
003441 TGTCTCAGCA TTATCAGACT AGCCCTGAGA TTCACTCCAG TTGAATTGGC TGAGGTTCTA TGGCCATTCT TGATCAGTCA 003520
003521 CTGGGGCCAA GGCAGTGAAT CAACTTCAGA ACCATATGGG TCCCTTCCAA GGAGACCCAG GGCTGTTGGA GAGGGGAAAG 003600
003601 AAAAATATGA ATGCAGGGAG GCACCAACAT ATGTCTGATA TCATTGTACT TTAATCTGTA GTTTGATCAT TTAAATTGCC 003680
003681 GTGGGTATAA GGTACCTCAA AAATAAATTT TTGTTTAGTT AGTTCACATA CAGCATGTAT TTTAAAACAG GTGTTAAATA 003760
003761 TTAAACTGTC TTTAAAGATT ACACTTACAA AGCTGATCTA AAACACCAGT AAGTTATCTG CTGATATACA ACTTAAGGAA 003840
003841 AAAATTAATT GCATATTAAA ATTAAAAATA CAAGTTTTTG TTAAGGTTTA CAAAAATACG GTGACAGACT TGAGATAGAA 003920
003921 ATTCTTGGTG GTGTTACTGT GACAAGTATT TCCATTGGTA ACCTGGGAAT CCATGCCCAG CACTGTGGTA TATGGCGTAT 004000
004001 TTTCTGGAAG ACTAGCCTTG GATTGAATTC ACAGTCTCCC TGGAGTTGTG GTTCCATTTG TCAGAAAGAT TCTTAGGGAT 004080
004081 TTAGACTGAC CAGGCTGTCA TGTTCTCACA CTCATACATT TGTAATTTTT GGAAAAACCA TAAAACCCAC CAGTCTTTGG 004160
004161 AGACTGTCCA GAAATAAACT TGATTCTAAA CTGGTTTGGT TTGGAAAATC CTTAGGCTAC TTGTGTTaaa aattaaagaa 004240
004241 ctagctgggc atggtggtgt gtacctgtag ttccagctac gcaggaggct gcggcaggag gattgcttga gcccaggagt 004320
004321 tcgaggctgc agtgttctgt gattgcgtct gtggagcgcc accgcacttc agtctggaca acataatgaa acctcatctc 004400
004401 TTAGAAATGA ACTGGCTGAT GTTAGGTACT TGCCAGGGTA GACGACCTTA ACTAAGCCCC TGGGGTTCTG TGAGACCTCT 004480
004481 GCAAATAGAT CTTCTGCTTA ACTGTTCAAA AAGGCAAGGG CTGTCCCCCT CAAAAAACAA CATTGACTTC TAGAGACCCA 004560
004561 TGGAGAGATG GAAGTTTCTG AAGACTGGCT TGCTAGATAG GAAAATAACC AATGCTCCAG CAGTGTTCTT GGGATTGGAA 004640
004641 TTTGCTGATT CATGTTTTTT AAAATGCATG ATCACATCAA ATTTGCTGAG CTGTTGACTA TCAACCCAGC CTAAACCCAC 004720
004721 CGGCTCTTAC CCTTTAACTT TCATAAAAGA GAAGCCTGAT TTTGTTCAGG TATCTAGCCT TCTCCCAAAG ACCCTGTGTG 004800
004801 GCTTGAAGGA TACCTTTGCT GGAGCCATGG ATAGGATAAA TCTCGATCAG TAAAACAATT AGGAAATCCT GTACTTTTGC 004880
004881 AATTGGTTCG gaatgattcg tacatgacaa aggacacacg aggcaatttg gaggggctct cattggccaa atctggcaaa 004960
004961 atttgagtat caaaaagata agatggtacc attgaataga aagagaatcg aactccatag ggatttcaaa gaaaaagagg 005040
005041 ttggggaggg tgcagagaaa aaaaacaaca gcatctttat agaagagtgc ccctaaaaaa atgcagaaag agagagtgag 005120
005121 aaaagtacca ctttgctacc accaaatgta ataattgatt aaggtatttt caccattgag tgggaagtta agaaatgaaa 005200
005201 catgtattct caaagtacca cctcatttaa aaaggagaag aggtactttt acacggataa atctgatgaa tacgacccca 005280
005281 accatgtagt cacaataatg ggacaattta atatgttctt ccccatgtcc tggatgccac tggaagtgca cactgcttgt 005360
005361 atgtaatatt cttgccaaaa tgtttatgct gaatctaatc atggggaagt aagacaaatc t
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Predicted Small Protein

Name NONHSAT059642_smProtein_3122:3334
Length 71
Molecular weight 8451.7356
Aromaticity 0.185714285714
Instability index 42.9315714286
Isoelectric point 7.96966552734
Runs 12
Runs residual 0.0265912305516
Runs probability 0.0359182712124
Amino acid sequence MPRYVHFYFRYPETGSLIHIKNLFPMRPLSHYTSLFPPLEYKYLEVTDHVLFNVMFSHLA
HSRCSSIFVE
Secondary structure LLEEEEEEEELLLLLLLEELLLLLLLLLLLLLLLLLLLLLEEEEEELLEEEEHHHHHHHH
LLLLLLEEEL
PRMN -
PiMo -