NONHSAT059724

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT059724

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2484 nt

Genomic location

chr18-:65455505..65458272

Exon number

2

Exons

65455505..65457409,65457694..65458272

Genome context

Sequence
000001 AGTGCTCCTT GGAGGGACCA TGTGAGCTGG AAGATAAGGC CATAAGTTGT CAGTAGATGT CAAACCCTTC GTTCCCAGAT 000080
000081 TAGCTGGGCC CAAGGTGGCA TGGTCACAGT CCTCAGAAGC ATATGCTTTC CTTAGCTGTG CAGCCACACA CTGTCTATTT 000160
000161 GTTCCAGAGC CAGGAGTGAC AGAGCAGAAA ATATATTCTG AAGATATAGC CTCAGGAGCT TCAACTTTCC CACCTCAGAA 000240
000241 TTTACCTTCT GAGATAACTC TTCATCCATA CGCCTATTCT CCTTTTACCC TCGACTCTAC ACAAAATGCT TGCTCAGCAC 000320
000321 CTGATCCCAG TATGATTATA ACCAACTCAG TTGTTACCAA GGTTTTCAAA CTGTGAGGCT CCAAAAGGAT TCCATGTGCC 000400
000401 ATTTTCCACA AGAAACAAAA CTCTGTTTAA GAACCAAACG ATGATGAGGA AAAAAATAAT GTGTAATGAG CAAAAGTTTG 000480
000481 ACAGTAAAAG GGCTGATGGA ACCATATCAT CTGAGACAAG ATCAGCTAAA CATTCACATC ATTAGTCCAT TCATGCTGAG 000560
000561 GACAGTTTGA AATCAAATGg caacaaaAAA CAAACAGGAA ACACAGAACC ACTGCAAAAA GTAGGTCTTC CACCAAACCT 000640
000641 GAATTTGAAT TTATCAGGTT GGATTTTCCT CAACTACAAG GTCCAGAGAA CAAAAGCAAC AACGATACAA AAGCAACCCA 000720
000721 AGTGGGGATC GGGCTACTCC ACGTGGACCA ACGTTTGTCT TCTAAGAGAA GTGGTGAATT CAGCTGACAT GTTCTCAGAG 000800
000801 GGTGAAAGAG TGGTGAAAAA CAATTATCCA AGTGAATCTG TAACTTCTGA TGCTGCTACC AACTCCCCTT CCTGTACAAG 000880
000881 AGTTATCCTG GACACCAGTG GTGATGCTGT TTGGCAGACA TTACGTATAG CACTGTCCCC AATCCCTAAA AACGGTGCTT 000960
000961 CCATGCTAAA CCTGGGTACC TATGAAGACA AGTGCTTCAT CAGCAGATCC TAAAGTTGTT AGTGTATAAT TTTTTGAAGT 001040
001041 TTTATCTTCA GATCCTTCCC ATAACAAAGG AAAACACGTT ATTCATCATG TGAAAATGTC TGAAGCATCA CATGCTGGCA 001120
001121 ACCTTGAACA AAATGAAGCC TCAGGGaaaa aaaaaaaaaa agaaagaaaa gaaaGGCAAG TTTAAATCGA AATACGAAAA 001200
001201 TCTAAATCGC ATTACGAATC CTGATAGCTC AAGAGCCACC AATAATTGAA GATGTCAAGG AGTTTCCCAA CCTGACTGCT 001280
001281 GCATCTGAAA GAAGAGAGAG TCGAGTCACC AAATTGCAAT CTAAACAGCA GCCATGGAAT AATTTTTTAA ATGGTTTAAA 001360
001361 GAAGAGCCAG ATTCCAGTAC GGCTGGGTTT GGGGAAAATG CTGACAGCAC TGAAAAAGCA GCAGCACTCG CAGTGTGCAG 001440
001441 ACCAGTGGTG TTCTCAGCCG GAGCCCTATG AGCCCTTTCC AGAGAAGCCG CGTGGGTCAG GTGAGGAGGC TCCCCGCACA 001520
001521 AGCCCTTCCA CTGCAGCATC CCCTTGAAGA AGAAGGGGAA AAAGAGAGAG GTTCCCAAGG CCATGAAGTC AACCTCACTG 001600
001601 AAGATTATGT GGCAAGAATG GCGAGAGAAA GCAGCAGCAT CTCCAAGAAA ATGCCAGGAG CCCAGCTTTT GCCAGTGATA 001680
001681 ATGCACAAAC CCAGGAGGTG GACCCCTCAG ATCCAGGGGG ATGGACTTCC CTGTCCCCTG CATTCCTGTG GCCCAGGGCA 001760
001761 GGACAGAAGA GCCGCGGGAC ACAGGACTCC AGAGGGACGC TGCAGCTTCC TTGCTCCCAA CCACTCTGCC TTTGCTAAGA 001840
001841 TTCACAGCCG CAGGTGCGGG ATCCCTGCAG CCAGAGGTTC AGTAAGGAAA TGGAAGCCTG TGTAACTGCG CCTGCTTCAA 001920
001921 TAACTGGTCC CTTTCCAAGA CCGTATGTGC CAGAAAGATC CAGCCAAAAC CAAGACCAAA GGCTGACTTG TGTAAGGACT 002000
002001 GAGTGACGTT TTCAAACATC TGGAGCTGAA AAAGTTGAAA TACATCGTTT ATCCCAGTTG TGAGAAGGTG CACAGGAAAG 002080
002081 GTGGGTTAGG GGACAGTGTG CACAACACCA TTGATGAGAC CTATGAGCAG AGCACTATTT TTTTATTTGC TCTCAACCAC 002160
002161 AGAGCTCTGC GAGGAGTTTC AACAAAGCAG ATCCTCTCAG TGTGGTGGAG AAACTTCAGC TAACAAGGGG CCCTGGACTA 002240
002241 GTTTCACAAG AGCTGAGGAT GGATCCTGGC AGGTGTGGAA GGCCAGGCTG GAGAATGTGC AAGGGGACCT CAACCTCTCC 002320
002321 AGCCCATTGC ACAGGGCTCC AGCTGCTCTG CAGAAGACAG AAAAAACAAC CACACTGCGT GGAAATCTGG AAAAATCATC 002400
002401 TGGAAGTCAG CAACCAATCT GTCCTAAAGC TACAAGAATC ATTGAAGGCT TCAACCTCCC AGATGATGAA CTTGAATTTT 002480
002481 TAAA
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Predicted Small Protein

Name NONHSAT059724_smProtein_2258:2482
Length 75
Molecular weight 8412.7438
Aromaticity 0.0405405405405
Instability index 55.8918918919
Isoelectric point 9.65899658203
Runs 11
Runs residual 0.00599868160844
Runs probability 0.0366944484592
Amino acid sequence MDPGRCGRPGWRMCKGTSTSPAHCTGLQLLCRRQKKQPHCVEIWKNHLEVSNQSVLKLQE
SLKASTSQMMNLNF
Secondary structure LLLLLLLLLLLLEELLLLLLHHHHHHHHHHHHHHLLLLLEEEEHHHHHEELLHHHHHHHH
HHHHHHHHHHLLLL
PRMN -
PiMo -