NONHSAT059861
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059861 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
858 nt |
Genomic location |
chr18+:71815773..71825275 |
Exon number |
3 |
Exons |
71815773..71816344,71822380..71822638,71825249..71825275 |
Genome context |
|
Sequence |
000001 GGCATGGCGG GGACACTGTG AATGTCAGCC CAGAAGGTGA TCAGAGCCTG TTAATTAAAA TGGAAAGAAG ACAGAAGGGA 000080
000081 AGGTAGACAT CAGGTTCTCC CTGGAGACTT TTCGTTTTCA TTTACGCTGC GGAAACTGAC GTTTTTGCCT AACACCCCAT 000160 000161 GTAATGTAAA CGTATAGGCT TGAGTACGTG TCCGGCCGCA TGTGTAGTGA ACCCTAAAGC TTTCCTAATT GTAGTTAGCA 000240 000241 TCGTCCCTAA GCGGAACGAT TTTCCGTGAA CATGATTTGT ACTTTTCTAC GAGCCGTACA GTATACGGAG AAGCTGCACA 000320 000321 GGTCCTCGGC AAAGCGATTG CTTTTGCCAT ACATCGTGCT TAACAAAGCG TGCTTGAAGA CTGAGCCCAG TTTGAGATGT 000400 000401 GGGCTTCAAT ATCAAAAGAA AACGCTGCGA CCTAGATGTA TTCTTGGAGT CACCCAGAAA ACCATCTGGA CGCAGGGACC 000480 000481 GAGCCCCCGA AAAGCAAAGG AGGATGGCAG CAAACAAGTG TCTGTGCACA GGAGTCAGAG AGGGGGAACC GCCGTCCCAA 000560 000561 CATCACAAAA AGTGAAAGAA GCCGGAAGAG ATTTTACCTA TTTAATAGTG GTGCTTTTTG GAATCAGCAT TACAGGTTGC 000640 000641 AAAAAACAGC AAGTATAAGC CCTTGAATAT TTTTTAAACT GGACTTTTTA TGTTGCCCTT GCTTCGCTTC ATCTTTGTTT 000720 000721 TCTGTGATTT CAGGTGGCTT GTTTTACACG ATTTTCAAAG AACTTTTTTC TTCATCCAGT CCTAGCAAGA TATATGGGAG 000800 000801 AGCCTTAGAA AAATGCAGAT CACATCCTGA GGTGATCGGT GTCTTTGGTG AGTCTGTT |
Predicted Small Protein
Name | NONHSAT059861_smProtein_689:784 |
Length | 32 |
Molecular weight | 3983.7457 |
Aromaticity | 0.290322580645 |
Instability index | 64.064516129 |
Isoelectric point | 8.02337646484 |
Runs | 7 |
Runs residual | 0.0245295698925 |
Runs probability | 0.0442248971662 |
Amino acid sequence | MLPLLRFIFVFCDFRWLVLHDFQRTFFFIQS |
Secondary structure | LLLHHHHEEEEELLLHHHHHHHHHHEEEEEL |
PRMN | LHHHHHHHHHHHHHHHHHHHLLLLLLLLLLL |
PiMo | i?????????????????????????????? |