NONHSAT059883
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059883 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1013 nt |
Genomic location |
chr18+:72589154..72617894 |
Exon number |
4 |
Exons |
72589154..72589319,72592992..72593075,72601874..72601994,72617253..72617894 |
Genome context |
|
Sequence |
000001 AAATTTACAT GCCACTTATG TGATAGAAGT TTCACAGAGA AGTGGGCCCT GAACAACCAC ATGAAACTCC ACACGGGAGA 000080
000081 AAAGCCGTTT AAATGTACCT GGCCCACGTG CCATTACTCA TTCCTCACAG CCTCCGCAAT GAAAGACCAC TACAGGACGC 000160 000161 ACACAGGCGA GAAGTCGTTT CTGTGTGACC TCTGCGGCTT TGCCGGCGGG ACCCGCCACG CCCTCACCAA GCATCGCAGA 000240 000241 CAGCACACAG GAGAAAAACC TTTCAAGTGC GATGAGTGTA ACTTTGCCTC CACAACTCAG TCCCATTTGA CTCGGCATAA 000320 000321 ACGTGTCCAC ACTGGAGAAA AGCCCTACAG ATGCCCCTGG TGTGACTACA GTGCCTATGA TTGGGTCTGA AAGGCTGGCC 000400 000401 TTGCTCCCAG ACGTTTAGAA AAGCAGCTAG ATGTGCACAG GTTTCCTGCG GGTGACAGAG AGGCCAGCGC AGCGCCTGCT 000480 000481 GTTCAGGAGC GTCTCAGAGG CACACGAGAG CCGGTTGGCT GCTCGCGCAG AGAGCGCATG TGGACACCTG GACAGCCGCG 000560 000561 TGACTTGGAA GCATGGGAGT TTATCCTCTC AAGGGTGGTG GATGAGACCA AGAATGCGTC AGTGTTCATC CACTTCTGTG 000640 000641 CTAACTTACA AGTTTCTTTC TCTTATGAGG CACTGTGCTG TTTTAGAATC ACTTTTTATC GCATAATAAA CATGAACAGA 000720 000721 AATATAACTG AGAAATGGAG AGAAAAATTC AATGTGCATC AATTTGTCCT AAGAACTAGT TTCAAAGAAT TTAGATTTAT 000800 000801 GAAAAGCAAA AAGTAATGAG TAAATGATCT AATGGAAATT ATCCCATTCA ATAAATAGCT ACCAGTTATA ATAAAGGAAA 000880 000881 ATAAAATTCA TAAGATTTAG AGCAAGGTGA TCCAGAAACT CTCCAACTAA AATTTCCTCT TGCTGAAAAT GTCCAAAGGA 000960 000961 TTGTATTTTG TGATTACCTC AGATTGCTGT AAACTCTTTT TATCTGAATA AAA |
Predicted Small Protein
Name | NONHSAT059883_smProtein_92:187 |
Length | 32 |
Molecular weight | 3647.218 |
Aromaticity | 0.0322580645161 |
Instability index | 68.735483871 |
Isoelectric point | 8.54986572266 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0190955661544 |
Amino acid sequence | MYLAHVPLLIPHSLRNERPLQDAHRREVVSV |
Secondary structure | LEELLLLLLLLLLLLLLLLHHHHHHHHLLLL |
PRMN | - |
PiMo | - |