NONHSAT059979

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT059979

Source

NONCODE4.0

Same with

,

Classification

sense

Length

913 nt

Genomic location

chr18-:74728935..74844770

Exon number

5

Exons

74728935..74729224,74778254..74778341,74809207..74809430,74817167..74817242,74844536..74844770

Genome context

Sequence
000001 TGCGCGCCCG TCCCTCGGAG CCGCCGCCGT CAGTCACCGC CGCCGCGCGC CAGAGAGAAG CAGCCTCCGG CCCCGGCGGC 000080
000081 CCCTGTCTCC CGACCCCGGA AGGCGAAGCA GGCTGCCCGG GGACCCCGCG CGTGGGCGCT TGAAGCCGAG ACCAGCCTGC 000160
000161 CCGGGCCTGG GCAGGCGGAG CAGGGCCTTG GACCCCGCGG CGCCCCTCGG CCTCGGAGCA ACGAGCGCAG CGCCGCCTCT 000240
000241 GAAGAGCCAA TCCATTCAGG ATGGGAAACC ACGCAGGCAA ACGAGAATTA AATGCCGAGA AGGCCAGTAC GGACATCGCC 000320
000321 CAGAGCAGCA ACATCCTGCG GAAAAGAGTG TCAGTGGCAT CTTTTGTTAT GCAGAGGAGA TGGAATCCTC CCAGGTGACT 000400
000401 GATAGCTGAG AGGGAGGGAA ACTATCAGGA GAGCCAAGAA GAGAGATGGG TTCCAGGAGG AGAAAGTTGT CCACAACAGG 000480
000481 AAGAGCTGCC ACAGGGCTCC CCTCTGCCTG GCTCCTGCAG ACCCCATCTT CACAGAATAG TGAAACTAAC AGAGGAGAAT 000560
000561 CTGAAAAAAA GAGAAACCTG GGTGAACTTT CACGGACAAC CTCAGAGGAC AACGAAGTGT TCGGAGAGGC AGATGCGAAC 000640
000641 CAGAACAATG GGACCTCCTC TCAGGACACA GCGGTGACTG ACTCCAAGCG CACAGCGGAC CCGAAGAATG CCTGGCAGGA 000720
000721 TGCCCACCCA GCTGACCCAG GGAGCCGCCC CCACTTGATC CGCCTCTTTT CCCGAGATGC CCCGGGGAGG GAGGACAACA 000800
000801 CCTTCAAAGA CAGGCCCTCT GAGTCCGACG AGCTCCAGAC CATCCAAGAA GACAGTGCAG CCACCTCCGA GAGCCTGGAT 000880
000881 GTGATGGCGT CACAGAAGAG ACCCTCCCAG AGG
[back to top]

Predicted Small Protein

Name NONHSAT059979_smProtein_260:397
Length 46
Molecular weight 5108.7819
Aromaticity 0.0444444444444
Instability index 81.3511111111
Isoelectric point 11.7172241211
Runs 9
Runs residual 0.0377525252525
Runs probability 0.0302655596773
Amino acid sequence MGNHAGKRELNAEKASTDIAQSSNILRKRVSVASFVMQRRWNPPR
Secondary structure LLLLLLLLLLLHHHHLHHHHHHHHHHHHLEEELEEEEEEEELLLL
PRMN -
PiMo -