NONHSAT059979
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059979 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
913 nt |
Genomic location |
chr18-:74728935..74844770 |
Exon number |
5 |
Exons |
74728935..74729224,74778254..74778341,74809207..74809430,74817167..74817242,74844536..74844770 |
Genome context |
|
Sequence |
000001 TGCGCGCCCG TCCCTCGGAG CCGCCGCCGT CAGTCACCGC CGCCGCGCGC CAGAGAGAAG CAGCCTCCGG CCCCGGCGGC 000080
000081 CCCTGTCTCC CGACCCCGGA AGGCGAAGCA GGCTGCCCGG GGACCCCGCG CGTGGGCGCT TGAAGCCGAG ACCAGCCTGC 000160 000161 CCGGGCCTGG GCAGGCGGAG CAGGGCCTTG GACCCCGCGG CGCCCCTCGG CCTCGGAGCA ACGAGCGCAG CGCCGCCTCT 000240 000241 GAAGAGCCAA TCCATTCAGG ATGGGAAACC ACGCAGGCAA ACGAGAATTA AATGCCGAGA AGGCCAGTAC GGACATCGCC 000320 000321 CAGAGCAGCA ACATCCTGCG GAAAAGAGTG TCAGTGGCAT CTTTTGTTAT GCAGAGGAGA TGGAATCCTC CCAGGTGACT 000400 000401 GATAGCTGAG AGGGAGGGAA ACTATCAGGA GAGCCAAGAA GAGAGATGGG TTCCAGGAGG AGAAAGTTGT CCACAACAGG 000480 000481 AAGAGCTGCC ACAGGGCTCC CCTCTGCCTG GCTCCTGCAG ACCCCATCTT CACAGAATAG TGAAACTAAC AGAGGAGAAT 000560 000561 CTGAAAAAAA GAGAAACCTG GGTGAACTTT CACGGACAAC CTCAGAGGAC AACGAAGTGT TCGGAGAGGC AGATGCGAAC 000640 000641 CAGAACAATG GGACCTCCTC TCAGGACACA GCGGTGACTG ACTCCAAGCG CACAGCGGAC CCGAAGAATG CCTGGCAGGA 000720 000721 TGCCCACCCA GCTGACCCAG GGAGCCGCCC CCACTTGATC CGCCTCTTTT CCCGAGATGC CCCGGGGAGG GAGGACAACA 000800 000801 CCTTCAAAGA CAGGCCCTCT GAGTCCGACG AGCTCCAGAC CATCCAAGAA GACAGTGCAG CCACCTCCGA GAGCCTGGAT 000880 000881 GTGATGGCGT CACAGAAGAG ACCCTCCCAG AGG |
Predicted Small Protein
Name | NONHSAT059979_smProtein_260:397 |
Length | 46 |
Molecular weight | 5108.7819 |
Aromaticity | 0.0444444444444 |
Instability index | 81.3511111111 |
Isoelectric point | 11.7172241211 |
Runs | 9 |
Runs residual | 0.0377525252525 |
Runs probability | 0.0302655596773 |
Amino acid sequence | MGNHAGKRELNAEKASTDIAQSSNILRKRVSVASFVMQRRWNPPR |
Secondary structure | LLLLLLLLLLLHHHHLHHHHHHHHHHHHLEEELEEEEEEEELLLL |
PRMN | - |
PiMo | - |