NONHSAT060051
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT060051 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2072 nt |
Genomic location |
chr18-:77437287..77439358 |
Exon number |
1 |
Exons |
77437287..77439358 |
Genome context |
|
Sequence |
000001 AATGCCTTGC GCGCCGCGGG CCCAGAGACG TGAGGCTGTC GGCGTCCTGG TGGCCCCGCC TCGTGTCCCC CCCCGGACCC 000080
000081 CACGCCGCGG GAGCTTGGGG GCTGCGGTCT TCTCTTCCTC CGACCTCACC TTCGATGCGG AAGCGCAGGG GCAGGTGCGC 000160 000161 CGCCCTCGGC CCGCGCAGGC GGTGGGCCCG TCTGGGGCAA GGCGCCCGGA AGCGCCTGGT TGGTTCAGAA AATCGGACCG 000240 000241 CAGCGGGAGG GCGGGCACCG GCGCGTGGTC TCAGTGGCCC CAGGCGAACC CTGATGAGCA GCAGCCGCAA GTGGCTTACT 000320 000321 AAAGGAGCCA CTTTCTACGT TTGTCTGGAA TTTACGTGAA TTAAGCTGGC GGGCGGGCGG CCAGGCCTGT AGTCTCAGCA 000400 000401 CTTTGGGAGG CTCAGCACTT CGGGAGGCTG TGGCGGGCGG ATCACCTGAG CCTGGGAGTT GGAGACCAGC CTGCGCAACG 000480 000481 TAGCAAGACC CTATCTCTAA AACAGATTCA TTAATACTTA GCCAGGCGCG GTGGCTGAGG TCCCAGCTAC TCGGCAGGCC 000560 000561 CAGGCTGGCC TGAGCCAGAC CGCTCTGGAC TGTTTTAATT TTTTCAGCCT TAATACCTGC CAGAATTTTT TTTTTACTAT 000640 000641 GTATCTTTGT CCTTACGTAT ATAAATTTTA TGTACAATTG AGATTATCCT GTATTTGCTT TTCCCCCCTC ACTTTTATAT 000720 000721 GGTGACTTTT CTCATGTTAG GCTGAATACT AACATTTTGG AAACTGTCGG CCTGAAAACG AGCGGAGACA CAGTTTCTCT 000800 000801 AAGTAGAGAG TTTATTTGGG CCACACTTGA GCACAAATTC AAGGCGCCCT GAATGTGTAC TCCGATTAGC AGTTAACAGT 000880 000881 GGATTTTAAA GGCAAAAAAG GGGGCCAGGG AGTGGACTAA TAGGAACTTG TTTGTGAGGA ATTCTCACTG GTTTACAGAA 000960 000961 ATAACATTGA TTAGTGACTG ACTATATGTT GTTCAGCTAT TGAGTGTGGG TATAGTGTCC ATTGTGGCGT CATTAGGTTA 001040 001041 ATTTATAGCT GTTTGTGGCG CTGTTGCCAC CAGTAGCAGT TTAAAGAGGT GAACACAGGT CAAGGGGTAG TAGGGCGCGA 001120 001121 TTGTCGCCTC ATTTGAATGT CTCTCTCGGC CTGATAATTA AAAGAACTCG CGTTCCTCAG ATAAAAATTC TCTTTTCTCA 001200 001201 AAACCATTTA AATGTGGTAA TTAGAATGGC CCAGAAGGGG CACAGTGCCT TTTAGCCCTC GCCATTACTT GCTCTTAGGA 001280 001281 GTGCATTTTT TGTAGCTGTG GGTTTTTGAC TATCTCTGCT GCTTTCTCCA GCCCCTACCC TCGTGACTAC AAGGGAAAAC 001360 001361 GTGCGGCGCT CACGAGAGAG CCTTTATGGG ATTTTTAAAA AATGGGGATT GTGGGAAAAT GGCTCCAGCA GTCACAGTTT 001440 001441 TTCAGTTTCT CACAATCCCA TAAAAACAGA GCAACCAGGT AACAAAACTA AAGCATGGGC AACATTTACA GACCGCTGGA 001520 001521 TGGTGAAGAA TTCCCATGAA CCCCTGGTTC ACACCGTAAG GACACACTAC TCAGCATGGG CAACATTTAC AGACTACTGG 001600 001601 ATGTGAAGAA TTCCCATGAA CCCCTGGTTC ACACTGTAAG GACAGACTAC TCAGCATGGG CAACATTTAC AGACCACTGG 001680 001681 ATGATGAAGA ATTCCCATGA ACTCCTGGTT CCAACTGTAA GGACACACTA CTCAGCTGTA GCCTGAAGCC GCCTCCTTAC 001760 001761 ATACTGTAAG TTTAGCCTAT AGGTTTCTCC ATACGTAGTG AACAGTCATC TAATTGGATG TGTGGACACT GTAACCTACT 001840 001841 CTTGAATCAG TCACAGGCAG CAGCACTTCA AACTCTGTTT CAATAAGCCA GACACGAGCT GTAGCCACCC TGCTGTTTGC 001920 001921 AGGCCTCACC TCTGCCTTCT GTGCCTCACT CCCTTTTCTG TCCGTAAGTC TTTGGCCACA CAGTGGCACT GGAGTCTCTC 002000 002001 TGAGCCTATT CTGGTTTGAG GGGTTCCCTG ATTCCTGAAT CATTCTTTGC TCAATTAAAC TCTGTAAAAT TT |
Predicted Small Protein
Name | NONHSAT060051_smProtein_134:358 |
Length | 75 |
Molecular weight | 8261.5848 |
Aromaticity | 0.0675675675676 |
Instability index | 78.9717567568 |
Isoelectric point | 12.225402832 |
Runs | 13 |
Runs residual | 0.0330257086355 |
Runs probability | 0.0319459731225 |
Amino acid sequence | MRKRRGRCAALGPRRRWARLGQGARKRLVGSENRTAAGGRAPARGLSGPRRTLMSSSRKW LTKGATFYVCLEFT |
Secondary structure | LLLLLLEELLLLLLHHHHHHLLLLEEEEELLLLLLLLLLLLLLLLLLLLLEEELLLLHHH HLLLLEEEEEEEEL |
PRMN | - |
PiMo | - |