NONHSAT060080
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT060080 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
808 nt |
Genomic location |
chr18+:77827256..77839206 |
Exon number |
4 |
Exons |
77827256..77827308,77829798..77829906,77837589..77837710,77838683..77839206 |
Genome context |
|
Sequence |
000001 CGTTCCTGCC CCAGAACTCA GTTGGGGGCT CGGAGCAGGA GAAGCTGCAC ACGGTGGATG AAGACCTGAT CATTGAAGTT 000080
000081 CACCAGTTAT TTTTCTCAAG AATGTGAATA ACAATGGGAT TTGCACTCAT TATATTTTTA GAATGGCTTC GCATAATTTT 000160 000161 CATGCATCCT GTGGACGATG AACACAAATG CAGCTGTGGC CGTGCCTGGC CTGTGTGTGT TGAACGCGTT CCTGCCGTGC 000240 000241 GGGAGCCACC TACCCAGCGG AGCCTCAGAG TCTGAGTTCT CAATgagtca acattttggg tgtgtatgcc aagaggtgac 000320 000321 acgaaacaga agttgggatc actgtggtta acctgagcat gttggagacc aaggagaggc tgatgttaat gttggatttt 000400 000401 tgtgaaaatg attcctttca aagaaagacc tgtgacagtt ggtaattgca gctaatgtgt ttccacaaac agccattttg 000480 000481 tgttggcaat cacaccgtcc accatcaggg ttgctgacag gagcagtgtt caggagtctc agacagtgga ttgtgctgct 000560 000561 tcaggcgcct gctggctgga gggtttgcag GCTGCCAGGG GCCTCAGCTG AAGACCTGGA CCCACAGGAC CCACAGAGGC 000640 000641 AAATTGTTCA GTTGACTGTA CAGTGTGAGA ATGAAACATT AATTCCCCTT CTCCACCTCA TATGAGAAAT GTGAATTGTC 000720 000721 TTTTTTAAAT TTGGGAATCT GGGTTATAGT ATGTGTGAGT CAATTTTTTC AACAATGACT TTTTTTTTGG CTCAAAAtgt 000800 000801 tttatttt |
Predicted Small Protein
Name | NONHSAT060080_smProtein_113:274 |
Length | 54 |
Molecular weight | 6206.3199 |
Aromaticity | 0.0943396226415 |
Instability index | 60.4452830189 |
Isoelectric point | 7.77862548828 |
Runs | 7 |
Runs residual | 0.0281868384722 |
Runs probability | 0.0350518585813 |
Amino acid sequence | MGFALIIFLEWLRIIFMHPVDDEHKCSCGRAWPVCVERVPAVREPPTQRSLRV |
Secondary structure | LLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLEEEEEELLLLLLLLLLLEELL |
PRMN | - |
PiMo | - |