NONHSAT060083

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT060083

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2358 nt

Genomic location

chr18+:77839658..77854783

Exon number

2

Exons

77839658..77840399,77853168..77854783

Genome context

Sequence
000001 ctcgtgattt gccacagtta gttctataaa gtcacctgaa cactgaattc gtggatacag agcccttgct tctggagaaa 000080
000081 tacagggcta ggttcctgcg agcttctggt cacattttca tcaaccaatc aatacataac cttgcttatg catgttcctg 000160
000161 tttaaagaca cctttttgaa tagacattgg tgatcccatt aacactgagt ccatggccaa cagcactgga actcacacct 000240
000241 gagtaaagct atctcacatt tctctgtgag gcacatcaca gcctcttgct cttaggacgc tagacagtac atcagtactg 000320
000321 ggcttggggt cattttaaac agcaaaatca ctaacaaaaa tcacagaaat gtgaagaata tggtgctatg tgggccgtga 000400
000401 aaagagcact tgttggtggc atgagctgaa atgaaatggt ggggcgtcac ctgtgtgacc tcagccaggC CCATGGCCTG 000480
000481 TGGCTGACTC TGGGGTGGCA CCGTGCTGGC AGGTGGGGCA CACTCAAAGA TGAGCTGTTA TTATCAAAGG GTGTGAAATT 000560
000561 TCCAGACAAC CACTGACTTG ATGAATCCTC TTGGGCACCA GAGCGTGTGC TGCATCTGAG ATGCTGGCTG GGGAGCCCAG 000640
000641 GCAGTCGAGG GGAGAGGAGC GCTCACTGTC TTACTGGAAA CAAGCTGTTT GGAGAACAAC CTGTTTTTAC TCTCCTTTTG 000720
000721 CAAGCAAAAC ACTCCCACTG AGCAATAGCG TTTATGGCAG CATTTAGCGG ACACAGAAGC ACATCTGAAA GTGGAGAGAG 000800
000801 ACGCGTTTCC CCATTGCTGG CCGAGTCCCA CCACTTTGCT CAGCTATGAA CACCTGACAT CTCGTTTCAT TTTCATGCAA 000880
000881 AATCTGGAGA TAATTATTAT CCACAATTCT AAGGCCTTAG GCCCCTCCGC ATGAGCCTGC CATTACCACT TCATTCCCTT 000960
000961 GCACCTGAAA GACTCCAGAG CCCCTTGAAA GAACAGGTCC TCCAAGAGGA GCATCGCCAG CCAGCCCCTG AATCTCCTGA 001040
001041 GGAAACTCTC ATGCACATAT CTTGACCTGA GCACAGACCG GACGCCAGCG GAGGGCAGGA GCAAGCAGGA CACACTGTGG 001120
001121 CTGAGGAGGG GACCCTGGGC TTGTGGGCCT CGGAGAGGCA GAGCAGGGGA GGCAGATGAG ACTGCACACA GCTTTTTGTT 001200
001201 TGACATATCC TAAGCCCCCT GCACACGCCA CTCAAGGTCT TCTCTGTGCC CCATCTGGTG CAGGAGGCCT GTCTGTCTGT 001280
001281 GAAATTGCTT TTAGCAATAG CTGTGGATCA CCACtgagag ggtgaatata caaatgaaca atgggcagac cgtctatgat 001360
001361 ggcaaaactt ggacctccaa cctTGAGGCC AAAGCACATC ATGTGCGGCC TCTGGCGGGA CTCAGGTCTG GGAAGCGact 001440
001441 gcagcttccc tattttctag ctctgcttcc aactaagaaa gtcagatatt ctccccaaac caaccccata ggatgcctgc 001520
001521 tgccaggtgg cccaccccca gcttccccct gacaacagcc tccacccagg gcatacccaa ccagagcctt cccatcttct 001600
001601 aatgggaagc ttcccctccc caccccacct tcaaggctct gccacgcgca gggacagtgt agccttcttg gctacagctt 001680
001681 cgagtgagca gcctctgcCA TCCTCGCTGA TGTCCCCGGT TACCGTGAAG GCTCCTCCAG GACACTGTCT GCACTGCCTG 001760
001761 TCGTCCAGAC CCCACCTCTG CCCAGGCACC CTGGCCTTAA TGCTGCAGCC CACAGGGCAC CCAGCTGGTG ACTGAGGCCT 001840
001841 GTTCTGAGCC CCTCGCTGGC ACATTCCTGG ACTTCTCAGT TTGGTGCCAG GGCCTCATTC CTGCTTCCCA TTTGCTCTGT 001920
001921 TACAGGGGAA TTAGTCCCTT CCTTTACTCT TTTGTGCTGT GCTTTCTAAA CGTGGTGTTT GTCATAATAA GAAGCATGAG 002000
002001 GGGCACAtgg atcagcctca cagacaggtg agtctgtagc tcttaccaga cccttgttca catccatgaa cttggctgtg 002080
002081 gatcaccagg gaaactgggt gaggttctgc catccagggg ttttgtcctg agaacttggc ttttagaaca ttctctctgg 002160
002161 ttttttgctt gggggtgggg gtctggtgca gggtgctggg tctgtgtttg gaggaggcca gcccgtaggc tgggggcctg 002240
002241 agacactgtg cactggcgtg atgcgtctgc cgcccatcac cagcttgcag gggcatccac ggctgaatcc tctgctcttc 002320
002321 caggaaagac ttatgcttct catggtccta gttctcat
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Predicted Small Protein

Name NONHSAT060083_smProtein_1601:1834
Length 78
Molecular weight 7939.0562
Aromaticity 0.025974025974
Instability index 93.8688311688
Isoelectric point 7.83343505859
Runs 10
Runs residual 0.00621118012422
Runs probability 0.0452835188129
Amino acid sequence MGSFPSPPHLQGSATRRDSVAFLATASSEQPLPSSLMSPVTVKAPPGHCLHCLSSRPHLC
PGTLALMLQPTGHPAGD
Secondary structure LLLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLEEELLLLLEEEELLLLLLLL
LLHHHHEELLLLLLLLL
PRMN -
PiMo -