NONHSAT060094
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT060094 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
983 nt |
Genomic location |
chr19-:60951..70966 |
Exon number |
2 |
Exons |
60951..61894,70928..70966 |
Genome context |
|
Sequence |
000001 GGAAGCGGCG GCGGGAGCTT CCGGGAGGGC GGCTCGCAGc tccatcttgt ctacaagatt ttgttagaag ccgtcaaaat 000080
000081 cctgctgact cgagatgcgc tgtggtgcat gttttccccg ggcacagcag gctaataatc ctgttacaaa gagaaatgct 000160 000161 gtacatttcg agcagtgctg gcccctggga ctcaccgtgg ccttttctaa gtgcttacag actctctgtt taataatcca 000240 000241 ttccagaaat tttccagggc tcattgttga gcttggtgtt cgcaactttg agtgatcagc ccttctcctt tgtgggagca 000320 000321 ccaggacaga gcagcctttg tccctcccca gtctcagttc cctcccactg cccctgtgGA CCTCGAATGC AGAGCTTATG 000400 000401 CACCTACCGA AGGTCGTGTC AGCACCCAAG GCAGAACGAG GCTGCCCTGG GAACTAGGGT CAATTAAGAC AGCTTGTGCT 000480 000481 GGAGGACCCT TTACAGCAGA TGAAGGCCTC TCCCCAGCCA GAAAAGATGG AGCACACGCT GGGTGGTGGC CCCGCTTCCT 000560 000561 CACTGGAAGG AGATGGTGCT CTTCTTTTTT CTTTCTGAAT TGTGGCCACC TTCATACCAG TCTGTCATGG AACACTTAAG 000640 000641 TCGCTTGAGT GCCTGCTGGT ACTCCCAGCC CTGCCATGCC TGAGCCCCCT GCACACAAGG AGCCAGGAGT AATCAGGGCA 000720 000721 GACCCTTTAG GGCACGGGGA CTTCTGGATT GTGAAATTGG CTCTCTGGGG GCCAAGGCCT TCTAACGTTG GTGGAAGTGG 000800 000801 CTTTGGCTTA TTGGGTCGGA TTCTAGGCCA TTCATTCCAA CCTTTAGAGA CATCCCAGCT TTCCCTAGCC CAGAGTCTGC 000880 000881 AGCCCCTCCA CCATCCCACA TCCTCCCCCT CCCTTTCCTC ATGAACCCCA GTCGCGCCTC TGCCTTCTCA AACCCCTCCA 000960 000961 CCATCCCACA CCCTCCTCCT GCC |
Predicted Small Protein
Name | NONHSAT060094_smProtein_572:682 |
Length | 37 |
Molecular weight | 4291.9466 |
Aromaticity | 0.194444444444 |
Instability index | 84.2555555556 |
Isoelectric point | 5.96087646484 |
Runs | 8 |
Runs residual | 0.0417637917638 |
Runs probability | 0.0457185126304 |
Amino acid sequence | MVLFFFLSELWPPSYQSVMEHLSRLSACWYSQPCHA |
Secondary structure | LEEHHHHHLLLLLLHHHHHHHHHHHLHHHHLLLLLL |
PRMN | - |
PiMo | - |