NONHSAT060170
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT060170 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
889 nt |
Genomic location |
chr19+:782711..785081 |
Exon number |
2 |
Exons |
782711..783332,784815..785081 |
Genome context |
|
Sequence |
000001 GAATCCCAGG AATGTGGGCG AGGTCCTCCT CCCGCCGGGG CCACCCTGGA CCCGGCGAGA AATCGAAGGT CCCCCAAGGA 000080
000081 CCCACGTCCA GGAGCCAACA GCCTCTCTGT GCAAACCAGA CAACCCTGCA GGAACTGTGC TTGAAGAAAC CGTGGAAACT 000160 000161 GCCCCCAACC CTCCCGTCTC TATTTCTTTC TCTGTTTTAT TATCTCATTC TTGGCTGTGA GGTAAACAGG AGAAAATGAG 000240 000241 AAGGTGGTTC TGGAGGACCC GACCGAATTT GCTTTCGTGA CAGGGTCAAG CGCCCTTTCC TCGCCGGCCG CAGCCCTCAC 000320 000321 CAAAGGGGAT TTGGGGGCCT CCGGACAGGG GTCCTGAAGG TTTTGAATTG TTCAATCTCT GGGGGTACAG GAACCCCTGC 000400 000401 AGGAGGTTTC AAAGGCAAGA GTTTCGCAGA GAGAAAAAAA CCATGAACTT TGCAGGTTGG TGGCGGAATC TGGTGATTTA 000480 000481 AGAAAACGTG TTTAAGCCTC GGCCGGGCCG CGCCTGGGCT GTCTGCGGTG CTCTTCCGGA ATTCTCTACA ATATCTGGAA 000560 000561 GTGACCAAGA AAATTCCAGA ACCCGGAGGC TGCGCCGTGG AGATAAACAT GGGCACCTGG GTGAAGGAAC TGCTGGACCA 000640 000641 GCAGAATGAG GGGCCAACGC CAGGGGCAGC ACTGCCCGGC CACAGAGGAC TGTGGCCCCA CAGATGACAC CCTCAGCTAC 000720 000721 CAGCTCCTGC ATCTGGAAGA TGACCAGGAG GAGGAAGGAC GGTCTGCAAG TGTTCAAAGT GATGTTTCCA GGCCGGGCGC 000800 000801 GCTTGTAATA CCAGCATTTG GGAGGCTGAG GCAGGCGGAT CACCTGAGGT CGGGAGTTCG AGACCAGCCT GACCAACGTG 000880 000881 GAGAAACCC |
Predicted Small Protein
Name | NONHSAT060170_smProtein_11:238 |
Length | 76 |
Molecular weight | 8509.8706 |
Aromaticity | 0.08 |
Instability index | 77.9694666667 |
Isoelectric point | 10.2366333008 |
Runs | 8 |
Runs residual | 0.0422695035461 |
Runs probability | 0.0389727963257 |
Amino acid sequence | MWARSSSRRGHPGPGEKSKVPQGPTSRSQQPLCANQTTLQELCLKKPWKLPPTLPSLFLS LFYYLILGCEVNRRK |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLHHHHHH HHHHEEELEEEELLL |
PRMN | - |
PiMo | - |